Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1665 |
Symbol | |
ID | 5109639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1826731 |
End bp | 1827600 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502893 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_001187161 |
Protein GI | 146306696 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACAC CCACCACCCT GAGCCTGAAG AAGATCTACT CGGGCAAGGT CCGCGACCTC TACGAAATCG ACGACAAGCG CATGCTGATG GTGGCCACCG ATCGTCTGTC GGCATTCGAC GTCATCCTCG AACAACCGAT TCCGGAGAAG GGCAAGATCC TCACCGCCAT CTCCAACTTC TGGTTCGACA AGCTGGCTGG CGTAGTGCCC AACCACTTCA CCGGTGACAA GGTCGAAGAC GTGGTGCCGG CAGCCGAGCT GCCACTGGTC GAAGGCCGTG CGGTCGTCGC CAAGCGCCTC AAGCCTGTCG CCGTGGAAGC CATCGTGCGT GGCTACATCG TCGGCTCCGG CTGGAAGGAG TACCAGAAGA GCGGCACCGT CTGCGGTATT GCCCTGCCGG CCGGTCTGAA GGAGGCGGCC AAGCTGCCGC AGCCGATCTT CACCCCCTCG ACCAAGGCTG CTGTAGGCGA CCACGACGAG AACATCAGCT TCGAGCAGTG CGAAGCCATC ATCGGCGCCG AGCTGGCCGC CAAGGTGCGT GACACCGCGA TCAAGCTGTA CACCACGGCT GTCGAGTACG CCGCTACCCG CGGCATCATC ATCGCCGACA CCAAGTTCGA ATTCGGCCTG GACGAAGACG GCACCCTGAC CCTGATGGAC GAGGTGCTGA CTCCAGACTC CAGCCGTTTC TGGCCGGCCG ACAGCTACGC CGAAGGCAGC AACCCGCCCA GCTTTGACAA GCAGTTCGTG CGCGACTGGC TGGAGTCCAC CGGCTGGAAC AAACAACCCC CGGCCCCGGC CGTGCCGGCG GACGTCGCGC AGAAAACCGC GGACAAATAC CGCGAAGCGC TGACCCGGCT GACCGCTTGA
|
Protein sequence | MSTPTTLSLK KIYSGKVRDL YEIDDKRMLM VATDRLSAFD VILEQPIPEK GKILTAISNF WFDKLAGVVP NHFTGDKVED VVPAAELPLV EGRAVVAKRL KPVAVEAIVR GYIVGSGWKE YQKSGTVCGI ALPAGLKEAA KLPQPIFTPS TKAAVGDHDE NISFEQCEAI IGAELAAKVR DTAIKLYTTA VEYAATRGII IADTKFEFGL DEDGTLTLMD EVLTPDSSRF WPADSYAEGS NPPSFDKQFV RDWLESTGWN KQPPAPAVPA DVAQKTADKY REALTRLTA
|
| |