Gene Pmen_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1664 
Symbol 
ID5109638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1825522 
End bp1826643 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID640502892 
Producthypothetical protein 
Protein accessionYP_001187160 
Protein GI146306695 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAC TGGCCGGATT TTCCGCCCTT GCTCTGATCG TCTCCAGCAC CAGCGGTTGT 
GGCTGGCTCT GGGGTGACAA TGGTTACTTC CGTGATCGCG GCAGCGACTA CCTGGAGGCG
CGTCAGACCG CGCCGATGCA ACTGCCGGCC AACGTTCAGG CCAAACGTCT CGACCCGCTG
CTGCCGGTGC CCGCGCAGGT AGCCAGCACC AGCGAAACCT CCGGCAAGTT CGAAGTGCCG
CGCCCGCAGA GCCTGCAGGT ACGTGCCGAT GAGCGTGAGT TCAGCCTGCA GCGCAGCGGC
GACTCGCGTT GGGTGGTTGC CCAGCGTGTA CCGGCCGAGG TCTGGCCGCT GGCGCGTCAG
TTCTTCGAGG ACAACGGTTT CCGCATCGCC AGCGAGCGTC CGCAGACTGG CGAATTCACC
ACCACCTGGC AGCGTTTCGA TGAGCTCTCC GCCAGCATGG CGCGCCGCCT GAGCAGCCGC
GTCTCCGGCG TCGCGCCGGA CGCCGAGACT CGCGTGCGCG TGCGCATCGA GCCCGGCGTG
CAGCGCAACA CCAGTGAGAT CTTCGTCACC AGCGCCGAGC GTCCGGCCGG CAGCACTGCC
GATGTCGATT TCGCCGCGCG CAGTGGCAAC GCCAGCCTGG AGGCGGCGCT GCTCGACGAA
ATGCTGGTGA GCATGGCGCG TGGCGTGGAG CAGGGCGGTT CCGTATCGCT GCTCGCTGCC
CGCGATTTCG ATGCGCCCAG CCGCGTCAGC CTGAGCGAAG ACGGCAACGG CAACCCGGTG
CTCAACCTCG GCGCCGACTT CGACCGTGCC TGGTCCGGCG TTGGTCGTTC GCTCGAGCTT
GGCAACGTGC GCGTCGACGA CCTCAACCGC AGCCTTGGCC TGTACTACAT CAACCTGGCC
GAAGGTGCCC AGGTCAACGA GCAGAAGCCC GGTTTCTTCG GTCGCATGTT CGGCAGCGAG
CCGAGCAAGG AAGAGATCGA AGCCCGCGCC GAGCGCTACC AGGTGCGTCT GACCCCGGTG
GGCGATGGCG TCCAGGTCAC CGTGGAAAAG GATCTCAACA CCGTTGCCCC GGCCGATGTG
TCGCGCCGCG TGCTGAGCCT GATCCAGGAT AATCTCGGCT GA
 
Protein sequence
MKRLAGFSAL ALIVSSTSGC GWLWGDNGYF RDRGSDYLEA RQTAPMQLPA NVQAKRLDPL 
LPVPAQVAST SETSGKFEVP RPQSLQVRAD EREFSLQRSG DSRWVVAQRV PAEVWPLARQ
FFEDNGFRIA SERPQTGEFT TTWQRFDELS ASMARRLSSR VSGVAPDAET RVRVRIEPGV
QRNTSEIFVT SAERPAGSTA DVDFAARSGN ASLEAALLDE MLVSMARGVE QGGSVSLLAA
RDFDAPSRVS LSEDGNGNPV LNLGADFDRA WSGVGRSLEL GNVRVDDLNR SLGLYYINLA
EGAQVNEQKP GFFGRMFGSE PSKEEIEARA ERYQVRLTPV GDGVQVTVEK DLNTVAPADV
SRRVLSLIQD NLG