Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1664 |
Symbol | |
ID | 5109638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1825522 |
End bp | 1826643 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502892 |
Product | hypothetical protein |
Protein accession | YP_001187160 |
Protein GI | 146306695 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3317] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGAC TGGCCGGATT TTCCGCCCTT GCTCTGATCG TCTCCAGCAC CAGCGGTTGT GGCTGGCTCT GGGGTGACAA TGGTTACTTC CGTGATCGCG GCAGCGACTA CCTGGAGGCG CGTCAGACCG CGCCGATGCA ACTGCCGGCC AACGTTCAGG CCAAACGTCT CGACCCGCTG CTGCCGGTGC CCGCGCAGGT AGCCAGCACC AGCGAAACCT CCGGCAAGTT CGAAGTGCCG CGCCCGCAGA GCCTGCAGGT ACGTGCCGAT GAGCGTGAGT TCAGCCTGCA GCGCAGCGGC GACTCGCGTT GGGTGGTTGC CCAGCGTGTA CCGGCCGAGG TCTGGCCGCT GGCGCGTCAG TTCTTCGAGG ACAACGGTTT CCGCATCGCC AGCGAGCGTC CGCAGACTGG CGAATTCACC ACCACCTGGC AGCGTTTCGA TGAGCTCTCC GCCAGCATGG CGCGCCGCCT GAGCAGCCGC GTCTCCGGCG TCGCGCCGGA CGCCGAGACT CGCGTGCGCG TGCGCATCGA GCCCGGCGTG CAGCGCAACA CCAGTGAGAT CTTCGTCACC AGCGCCGAGC GTCCGGCCGG CAGCACTGCC GATGTCGATT TCGCCGCGCG CAGTGGCAAC GCCAGCCTGG AGGCGGCGCT GCTCGACGAA ATGCTGGTGA GCATGGCGCG TGGCGTGGAG CAGGGCGGTT CCGTATCGCT GCTCGCTGCC CGCGATTTCG ATGCGCCCAG CCGCGTCAGC CTGAGCGAAG ACGGCAACGG CAACCCGGTG CTCAACCTCG GCGCCGACTT CGACCGTGCC TGGTCCGGCG TTGGTCGTTC GCTCGAGCTT GGCAACGTGC GCGTCGACGA CCTCAACCGC AGCCTTGGCC TGTACTACAT CAACCTGGCC GAAGGTGCCC AGGTCAACGA GCAGAAGCCC GGTTTCTTCG GTCGCATGTT CGGCAGCGAG CCGAGCAAGG AAGAGATCGA AGCCCGCGCC GAGCGCTACC AGGTGCGTCT GACCCCGGTG GGCGATGGCG TCCAGGTCAC CGTGGAAAAG GATCTCAACA CCGTTGCCCC GGCCGATGTG TCGCGCCGCG TGCTGAGCCT GATCCAGGAT AATCTCGGCT GA
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Protein sequence | MKRLAGFSAL ALIVSSTSGC GWLWGDNGYF RDRGSDYLEA RQTAPMQLPA NVQAKRLDPL LPVPAQVAST SETSGKFEVP RPQSLQVRAD EREFSLQRSG DSRWVVAQRV PAEVWPLARQ FFEDNGFRIA SERPQTGEFT TTWQRFDELS ASMARRLSSR VSGVAPDAET RVRVRIEPGV QRNTSEIFVT SAERPAGSTA DVDFAARSGN ASLEAALLDE MLVSMARGVE QGGSVSLLAA RDFDAPSRVS LSEDGNGNPV LNLGADFDRA WSGVGRSLEL GNVRVDDLNR SLGLYYINLA EGAQVNEQKP GFFGRMFGSE PSKEEIEARA ERYQVRLTPV GDGVQVTVEK DLNTVAPADV SRRVLSLIQD NLG
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