| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1657 |
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| Symbol | |
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| ID | 5109631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1818602 |
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| End bp | 1820305 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502885 |
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| Product | amidase |
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| Protein accession | YP_001187153 |
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| Protein GI | 146306688 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.91372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGG TAACCGAAGT TTCCATCGCC GAGCTGCGTG CCGCGCTGGA GTCCGGCCGC
ACCACGGCGG TCGAACTGGT CAAGGCCTAT CTGGCGCGTA TCGATGCCTA TGACGGGCCG
AACACGCCGA CCCGACTCAA CGCGGTGGTG GTGCGCAACC CCGATGCGCT GAAGGAGGCC
GAGGCCTCCG ATGCGCGCCG TGCCCGCGGC GAAACCCTCG GTCCGCTCGA TGGCATCCCC
TACACCGCCA AGGACAGCTA CCTGGTCAAG GGCCTGACGG CGGCCTCGGG CAGCCCTGCG
TTCAAGGACC TGGTGGCGCA GCGCGACGCC TTCACCATCG AGCGCCTGCG CGCGGCCGGC
GCCATCTGCC TGGGCAAGAC CAATATGCCG CCGATGGCCA ACGGCGGCAT GCAGCGCGGC
GTCTACGGCC GTGCGGAAAG CCCGTACAAC GCCGATTACC TCACCGCGCC GTTCGCCTCG
GGTTCGTCCA ACGGCGCCGG TACGGCGACC GCCGCCAGCT TCTCCGCCTT CGGCCTGGCC
GAGGAAACCT GGTCCAGCGG GCGCGGCCCG GCCTCGAACA ACGGCCTGTG CGCCTACACG
CCCTCGCGCG GGGTGATCTC GGTGCGCGGC AACTGGCCGC TGACGCCGAC CATGGACGTG
GTGGTGCCCT ACGCCCGCAC CATGGCCGAC CTGCTGCAGG TGCTCGACGT GGTGGTCGCC
GACGATCCGG ACACCCGTGG CGACCTGTGG CGCTTGCAGC CCTGGGTGCC GATCCCGAAA
GCCTCCGAGG TGCGTCCCGC GTCCTACCTG GCGCTGGCGG CCAGAGCCGA TGCGCTGAAG
GGTAAGCGCC TTGGCGTACC GAAGATGTTT ATCAACAAGG ACGAGCTGGC CGGTACCAGC
GAGAATCCCG GTATCGGCGG GCCGACCGGC CAGCGCATCC ACGCCCGGCC GACGGTGATC
GCCCTGTGGG AGGCGGCGCG CCAGGCGCTG GAAGCGGCCG GCGCCGAAGT GGTGGAAGTG
GACTTCCCGC TGGTGTCGAA CTGCGAGGGC GACCGCCCCG GCGCGCCGAC GGTGTTCAAC
CGCGGCATCG TCAGCCCGGA ATTCCTCCAT GACGAGCTGT GGGAGCTGAG CGGCTGGGCC
TTCGACGACT TCCTGCGCGC CAATGGCGAC CCGAAGCTCA ATCGCCTGGC CGATGTGGAC
GGCCCGCAGA TCTTCCCGCA CGACCCCGGC ACGCTGCCGA ACCGCGAGGG CGACCTGGCG
GCGGGCATGG ACGAGTACGT CAACATGGCC AAGCGCGGCA TCAAACCCTG GGATCAGATC
GCCACGCTGC CCGACGGCCT GCGCGGCCTG GAGCGCACAC GCAAGATCGA CCTGGAAGAC
TGGATGGACG AGCTGGGCCT GGACGCGGTG CTGTTCCCCA CCGTGGCCGA CGTCGGCCCG
GCCGATGCCG ACGTCAACCC GGCATCGGCG GACATCGCCT GGAGCAATGG CGTATGGGTG
GCCAACGGCA ACCTGGCGAT TCGTCACCTG GGTGTGCCCA CCGTGACCGT GCCGATGGGC
GTGATGGCCG ACATCGGCAT GCCGGTGGGG CTGACCTTCG CCGGCCGCGC TTACGACGAC
TCGGCGCTGC TGCAACTGGC GGCGGCCTAC GAGTCCACCG GTAGCAAGCG CCTGATCCCG
CCGCGCACCC CGCCCTTGGC GTGA
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| Protein sequence | MIEVTEVSIA ELRAALESGR TTAVELVKAY LARIDAYDGP NTPTRLNAVV VRNPDALKEA
EASDARRARG ETLGPLDGIP YTAKDSYLVK GLTAASGSPA FKDLVAQRDA FTIERLRAAG
AICLGKTNMP PMANGGMQRG VYGRAESPYN ADYLTAPFAS GSSNGAGTAT AASFSAFGLA
EETWSSGRGP ASNNGLCAYT PSRGVISVRG NWPLTPTMDV VVPYARTMAD LLQVLDVVVA
DDPDTRGDLW RLQPWVPIPK ASEVRPASYL ALAARADALK GKRLGVPKMF INKDELAGTS
ENPGIGGPTG QRIHARPTVI ALWEAARQAL EAAGAEVVEV DFPLVSNCEG DRPGAPTVFN
RGIVSPEFLH DELWELSGWA FDDFLRANGD PKLNRLADVD GPQIFPHDPG TLPNREGDLA
AGMDEYVNMA KRGIKPWDQI ATLPDGLRGL ERTRKIDLED WMDELGLDAV LFPTVADVGP
ADADVNPASA DIAWSNGVWV ANGNLAIRHL GVPTVTVPMG VMADIGMPVG LTFAGRAYDD
SALLQLAAAY ESTGSKRLIP PRTPPLA
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