| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1633 |
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| Symbol | tmk |
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| ID | 5109291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1796076 |
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| End bp | 1796708 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502861 |
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| Product | thymidylate kinase |
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| Protein accession | YP_001187129 |
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| Protein GI | 146306664 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGTC TGTTTATTAC CCTGGAAGGC CCGGAAGGCG CTGGCAAAAG CACCAACCGC
GAATATCTGG CCGAGCGCCT GCGCGAGCAG GGCGTCGACG TAGTGCTGAC CCGTGAACCC
GGCGGCACAC CGCTGGCCGA GCGTATCCGC GAGCTGCTGC TCGACCCCAG CGACGAGCCG
ATGGCGGCCG ATACCGAGCT GCTGCTGGTG TTCGCCGCGC GTGCTCAGCA CCTGCAGCAG
GTCATTCGCC CGGCTTTGGC CAAGGGCTGT GTGGTGCTGT GCGACCGTTT TACCGATGCC
ACCTATGCCT ATCAGGGCGG CGGGCGAGGA CTGTCCATCG AGCGCATTGC GCAGCTGGAG
CAGTTCGTCC AGGGCGAGCT GCGTCCCGAC CTGACGCTGA TTTTCGATCT GCCGGTGGAA
GTCGGTCTGG CTCGCGCCGC GGCGCGCGGG CGCCTGGACC GTTTCGAGCA GGAAGGCCGT
GGCTTCTTCG AAGCGGTACG CCAGGCTTAC CTGCAGCGCG CCGTGCAGGC GCCACAACAT
TATCGCGTGC TGGATGCCGG ACAGACCCTG GCTCAGGTGC AGGCCGATAT CGACGCCTTG
CTGCCGAGCC TGCTGGAGGC CTGCCGTGGC TGA
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| Protein sequence | MTGLFITLEG PEGAGKSTNR EYLAERLREQ GVDVVLTREP GGTPLAERIR ELLLDPSDEP
MAADTELLLV FAARAQHLQQ VIRPALAKGC VVLCDRFTDA TYAYQGGGRG LSIERIAQLE
QFVQGELRPD LTLIFDLPVE VGLARAAARG RLDRFEQEGR GFFEAVRQAY LQRAVQAPQH
YRVLDAGQTL AQVQADIDAL LPSLLEACRG
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