Gene Pmen_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1628 
SymbolfabG 
ID5109286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1791627 
End bp1792370 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID640502856 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001187124 
Protein GI146306659 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGC AAGGTAAGGT CGCGCTGGTC ACCGGCGCCA GCCGTGGTAT CGGTCAGGCA 
ATCGCTCTGG AGCTGGGCCG TCAGGGCGCC ATCGTCATCG GCACCGCCAC CAGCGCCTCG
GGCGCCGAGC GCATCGCCGA AACCCTCAAG GCCAATGGGG TCGAAGGTGC CGGTCTGGTG
CTCGACGTGA GCAACGATGA GTCGGTTGCC ACCACGCTCG AACACATCCA GCAACATCTT
GGTCAACCGT TGATCCTGGT CAACAATGCC GGCATCACCC GTGACAATCT GATGCTGCGC
ATGAAGGACG ACGAGTGGCA TGACGTCATC AACACCAACC TGAACAGCCT CTACCGTCTG
TCCAAGGCTG TACTGCGTGG CATGACCAAG GCGCGTTTCG GGCGCATCAT CAACATCGGC
TCCGTGGTCG GGGCCATGGG CAACGCCGGG CAGGTCAACT ACGCTGCAGC CAAGGCCGGT
CTGGAAGGTT TCAGCCGCGC GCTGGCGCGT GAAGTGGGGT CGCGCGGCAT CACGGTCAAC
TCGGTGGCGC CCGGTTTCAT CGACACCGAC ATGACCCGAG AGCTGCCGGA AGGCCAGCGC
GATGCGCTGC TGACCCAGAT TCCGCTGGGC CGCCTGGGGC AGGCTGAAGA GATCGCCAAA
GTGGTCGGTT TCCTGGCTTC CGATGGCGCA GGTTACGTCA CCGGGGCTAC TATCCCGGTG
AACGGCGGTA TGTACATGAG CTAA
 
Protein sequence
MSLQGKVALV TGASRGIGQA IALELGRQGA IVIGTATSAS GAERIAETLK ANGVEGAGLV 
LDVSNDESVA TTLEHIQQHL GQPLILVNNA GITRDNLMLR MKDDEWHDVI NTNLNSLYRL
SKAVLRGMTK ARFGRIINIG SVVGAMGNAG QVNYAAAKAG LEGFSRALAR EVGSRGITVN
SVAPGFIDTD MTRELPEGQR DALLTQIPLG RLGQAEEIAK VVGFLASDGA GYVTGATIPV
NGGMYMS