| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1616 |
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| Symbol | |
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| ID | 5109274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1779474 |
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| End bp | 1780238 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502844 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001187112 |
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| Protein GI | 146306647 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.381419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0932139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG CCTTCACCGT CGTCATTCCC GCCCGTTACG CCTCCACCCG CCTGCCCGGC
AAACCGCTGC AGGACATCGC CGGCAAGCCC ATGGTGCAGC ACGTCTGGGA GCAGGCGAAG
AAAAGTTCGG CCAGCCGCGT GGTGGTCGCC ACCGACGATG CGCGCATCGT CGAGGCCTGT
AAGGTCTTCG GCGCCGAGGT GCTGCTGACC CGCGAGGATC ACAACTCCGG CACCGACCGT
CTGGCCGAAG TGGCCACCCA GCTCGGCCTG CCGGCCGATG CCATCGTGGT CAACGTGCAG
GGTGACGAGC CGCTGGTTCC CCCATCGATC ATCGATCAGG TGGCGGCCAA CCTGGCGACC
AACCCGCAGG CCGGTATCGC CACCCTGGCC GAGCCCATCG AAGACGTCAC CGCGCTGTTC
AATCCCAATG TGGTCAAGGT GGTGGCCGAC AAGAGCGGTC TGGCCCTGAC CTTCAGCCGT
GCGCCACTGG CCTGGGCGCG CGACGCCTTC GCCAAGAGCC GCGATGTGCT GCCGGCCGGC
GTGCCCTATC GCCGCCATAT CGGCATCTAC GCCTACCGCG CGGGCTTCCT GCATGACTTC
GTCGCCTGGG GCCCGTGCTG GCTGGAAGAC ACCGAGTGCC TGGAGCAGCT GCGTGCGCTG
TACAACGGTG TGCGCATCCA TGTCGCCGAT GCTCTGGAGG CGCCAGCAGC TGGTGTGGAT
ACCGCCGAAG ACCTGGAGCG GGTGCGCCGC CTGCTGGGGG CCTGA
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| Protein sequence | MSAAFTVVIP ARYASTRLPG KPLQDIAGKP MVQHVWEQAK KSSASRVVVA TDDARIVEAC
KVFGAEVLLT REDHNSGTDR LAEVATQLGL PADAIVVNVQ GDEPLVPPSI IDQVAANLAT
NPQAGIATLA EPIEDVTALF NPNVVKVVAD KSGLALTFSR APLAWARDAF AKSRDVLPAG
VPYRRHIGIY AYRAGFLHDF VAWGPCWLED TECLEQLRAL YNGVRIHVAD ALEAPAAGVD
TAEDLERVRR LLGA
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