| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1606 |
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| Symbol | |
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| ID | 5109264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1770158 |
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| End bp | 1770724 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502834 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_001187102 |
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| Protein GI | 146306637 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.321815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0962013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGACTA ACGATGTAGA TGATCGCCGC GAATACTATC GTATCGAGGA TACGATCGCA
CTGGAATTCA GCCTGCTGTC CGGGGCCGAA GCCTATGCCA GCGACGTACT TCACGACCCG
TCGCCGCTAT TCAATCTGCT CAGCGATCTG CACCTGATGG ACTTCGAGTC GCAGCATCTG
CTGCGCCACA TCAGCGAGCG TGACCGCACC CTGGCCAACT ACCTGAAGGT GATCAACAAG
CGCATCGACC TGCTCGGTCA GGCGGTCGCC CAGAGCCTGC TGCGCGATAT CGGCGCACCG
CGTCAGGTGT CGCTGTCCGA AGGCGGCATC AGCTTCAATA ACGCCCAGGC CGTGGCGCCG
GGCAGCCATC TGGCGATCAA GATGGTCTTG ATGCCGCAGG CGCTCGGTCT GCTGCTACGG
GCCAAGGTCG TGCATTGCAG CCAGCGTGCA GATGGCCAAT ATGAAGTCGG TACCGAGTTC
GAAGCGTTGA CCGACGCACA GCGCCAGTTA CTGGCTCGGC ATATCCTGCA GAAACAGGCT
CTGGAACGTC GCCAGGCTCG TGAATGA
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| Protein sequence | MSTNDVDDRR EYYRIEDTIA LEFSLLSGAE AYASDVLHDP SPLFNLLSDL HLMDFESQHL
LRHISERDRT LANYLKVINK RIDLLGQAVA QSLLRDIGAP RQVSLSEGGI SFNNAQAVAP
GSHLAIKMVL MPQALGLLLR AKVVHCSQRA DGQYEVGTEF EALTDAQRQL LARHILQKQA
LERRQARE
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