| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1600 |
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| Symbol | |
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| ID | 5109258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1764881 |
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| End bp | 1766104 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640502828 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit F |
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| Protein accession | YP_001187096 |
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| Protein GI | 146306631 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | [TIGR01941] NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00235477 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.010966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACG AAATCTTCCT CGCCATCGGC ATGTTCACCG CCATCGTTCT CGCGCTGGTG
CTGATCATCC TCGCTGCGCG CGCCAAGCTG GTGTCCAGCG GTGACGTGAG CATCGAGATC
AACGGCGAAA AAACCATCGT GGTACCGGCC GGCGGCAAGC TGCTGCAAAC CCTGGCCGAC
AACAACATCT TCCTGTCCTC CGCCTGCGGC GGCGGCGGTA CCTGCGCCCA GTGCAAGTGC
ATCGTCGAAA GCGGCGGCGG CGAGATGCTC TCCACCGAAG AGTCGCACTT CACCAAGCGC
GAGGCCCGCG AAGGCTGGCG CCTGTCCTGC CAGACCCCGG TCAAGCAGGA CATGAAGATC
GAAGTCCCGG AAGAGGTCTT CGGCGTCAAG AAGTGGGAGT GCACCGTCCA GTCCAACCCC
AACGTCGCCA CCTTCATCAA GGAGCTGACG CTGAAGCTGC CGGAAGGCGA GAACGTCGAC
TTCCGCGCCG GTGGCTACGT GCAGCTGGAA TGTCCGCCGC ATACCGTGTA CTACAAGGAC
TTCGATATCC AGGAGGAGTA TCGCGGCGAC TGGGACAAGT TCAACCTGTG GAAGTACGTG
TCCAAGGTCG ATGAGACCGT GATCCGTGCC TATTCCATGG CCAACTATCC GGAAGAGCGC
GGTCTGGTGA AGTTCAACAT CCGTATCGCC TCGCCGCCCC CCGGCAAGGA CGATCTGCCG
CCGGGCAAGA TGTCGTCCTA CGTGTTCAGC CTCAAGCCGG GCGACAAGAT CACCGTGTAC
GGGCCCTTCG GTGAGTTCTT CGCCAAGGAC ACCGACGCCG AGATGGTCTT CATCGGTGGT
GGTGCCGGCA TGGCGCCGAT GCGTTCGCAC ATCTTCGACC AGCTCAAGCG CCTGAAATCC
AAGCGCAAGA TCAGCTTCTG GTACGGCGCG CGTTCCTTGC GCGAGTCGTT CTACAACGAA
GAGTTCGATA AGCTGGCCGC GGAAAACCCG AACTTCGAGT GGCACCTGGC GCTGTCCGAC
CCACAGCCGG AAGACAACTG GACCGGTCTT ACTGGCTTCA TCCACAACGT GCTGTACGAG
AACTACCTGA AGGACCACCC GGCTCCGGAA GATTGCGAGT TCTACATGTG CGGCCCACCC
ATGATGAACG CCGCGGTGAT CAAGATGCTC ACCGACCTGG GCGTCGAGCC GGAGAACATC
CTCCTCGACG ACTTCGGCGG CTAA
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| Protein sequence | MNYEIFLAIG MFTAIVLALV LIILAARAKL VSSGDVSIEI NGEKTIVVPA GGKLLQTLAD
NNIFLSSACG GGGTCAQCKC IVESGGGEML STEESHFTKR EAREGWRLSC QTPVKQDMKI
EVPEEVFGVK KWECTVQSNP NVATFIKELT LKLPEGENVD FRAGGYVQLE CPPHTVYYKD
FDIQEEYRGD WDKFNLWKYV SKVDETVIRA YSMANYPEER GLVKFNIRIA SPPPGKDDLP
PGKMSSYVFS LKPGDKITVY GPFGEFFAKD TDAEMVFIGG GAGMAPMRSH IFDQLKRLKS
KRKISFWYGA RSLRESFYNE EFDKLAAENP NFEWHLALSD PQPEDNWTGL TGFIHNVLYE
NYLKDHPAPE DCEFYMCGPP MMNAAVIKML TDLGVEPENI LLDDFGG
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