| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1599 |
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| Symbol | |
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| ID | 5109257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1764257 |
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| End bp | 1764865 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502827 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_001187095 |
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| Protein GI | 146306630 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
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| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000363423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0311409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATT ACATCAGCCT GTTCGTCCGT GCGGTGTTCG TCGAGAACAT GGCGCTGGCG
TTCTTCCTCG GCATGTGTAC CTTCATCGCC ATCTCCAAGA AGGTGGAAAC CGCCATCGGT
CTCGGCGTTG CGGTGATCGT GGTGCTGGGC ATCACCATGC CGGTGAACAA CCTGATCTAC
GCCAACATCC TCAAGGATGG CGCGCTGGCC TGGGCCGGCC TGCCTGAAGT GGACCTGTCG
TTCCTCGGCC TGCTGACCTT CATCGGCGTG ATCGCGGCAC TGGTGCAGAT CCTCGAGATG
ACCCTCGATA AGTACGTGCC GTCGCTGTAC AACGCCCTGG GTGTGTTCCT GCCGCTGATC
ACCGTGAACT GCGCCATCAT GGGTGGTTCG CTGTTCATGG TCGAGCGTGA TTACAACCTG
GCCGAAAGCA CCGTTTACGG TATCGGCGCG GGTGTGTCCT GGGCACTGGC CATCGCCGCG
CTGGCGGGTA TTCGCGAGAA GCTCAAGTAC AGCGACGTAC CGGCTGGCCT GCAGGGTCTG
GGCATCACCT TCATCACCAT CGGTCTGATG TCGCTGGGCT TCATGTCCTT CTCCGGCGTG
CAGCTGTAA
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| Protein sequence | MEHYISLFVR AVFVENMALA FFLGMCTFIA ISKKVETAIG LGVAVIVVLG ITMPVNNLIY
ANILKDGALA WAGLPEVDLS FLGLLTFIGV IAALVQILEM TLDKYVPSLY NALGVFLPLI
TVNCAIMGGS LFMVERDYNL AESTVYGIGA GVSWALAIAA LAGIREKLKY SDVPAGLQGL
GITFITIGLM SLGFMSFSGV QL
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