| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1597 |
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| Symbol | |
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| ID | 5109255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1762798 |
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| End bp | 1763586 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502825 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit C |
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| Protein accession | YP_001187093 |
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| Protein GI | 146306628 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC |
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| TIGRFAM ID | [TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000998757 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0301859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGTC AAAAAGAATC CACCGTCCGT ACGCTGACGG TGGCCCTGCT GGTGTGTCTG
GTGTGCTCGG TGTTCGTCGC CGGCGCCGCC ATCGCACTGA AGCCGACCCA GGTGGAAAAC
CGCCTGCTGG ACAAACAGCG CAGCATCCTG GCCATCGCCG GCCTCGGTCA GGCGGGCATG
TCCAGTGCCA AGGTCAAGGA AGTGTTCGAC AGCACCATCA CCGCCAAGCT GGTGGACCTG
GAGAGCGGCA AGTTCTCCGA TGCCTTCGAT CCGATCACCT TCGACCCGCT CAAGGCCTCG
AAGGATCCGA AGACCTCCAG CGCGCTCAGG AGCAGCGAGG ACATTGCCGG GATCAAGCGC
CAGGAGCGCT ACACCACCGT GTACATGGTG GAGAAGGACG GTGAAGTCGA AACCCTGATC
CTTCCGGTGC GCGGTTACGG CCTATGGTCG ACCCTGCACG GCTTCATCGC GGTGAAGGGC
GATCTGAACA CCGTGGTCGG CATGGGTTTC TATCAGCACG GCGAGACCCC GGGTCTCGGC
GGCGAAGTGG ATAACCCGAA ATGGACTGGC CAGTGGCCCG GCAAGACCCT GTACGACGAC
AACGGCAAGC TGGCCGTGCA GATCGTCAAG GGCGGTGTCG ATCCGCAGAG CCCGCAAGCC
ACTCACCAGG TCGATGGCCT GGCCGGTGCC ACCCTGACCA GCGTCGGTGT GGACAACCTG
CTGAAGTTCT GGCTTGGCCA GAACGGCTTC GGTCCGTTTA TCGCTAACCT GCGCGCAGGG
GAGGCCTGA
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| Protein sequence | MSSQKESTVR TLTVALLVCL VCSVFVAGAA IALKPTQVEN RLLDKQRSIL AIAGLGQAGM
SSAKVKEVFD STITAKLVDL ESGKFSDAFD PITFDPLKAS KDPKTSSALR SSEDIAGIKR
QERYTTVYMV EKDGEVETLI LPVRGYGLWS TLHGFIAVKG DLNTVVGMGF YQHGETPGLG
GEVDNPKWTG QWPGKTLYDD NGKLAVQIVK GGVDPQSPQA THQVDGLAGA TLTSVGVDNL
LKFWLGQNGF GPFIANLRAG EA
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