| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1595 |
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| Symbol | |
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| ID | 5109253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1760253 |
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| End bp | 1761590 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502823 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit A |
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| Protein accession | YP_001187091 |
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| Protein GI | 146306626 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
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| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.051744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.253691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAC TAAAGCATGG GCTCGATTTG CCCATAACGG GTGCGCCGGC ACAGCGTATC
GAGGCCGCCA GGCCCGTGCG CAGTGTCGCC GTCATCGGCT TCGACTATCA CGGGATGAAG
CCGACGATGG AAGTGCAGGT CGGTGACCGG GTCAAGCTCG GTCAATTGCT GTTCACCGAC
AAGAAGACAC CCGGCGTGCG CTACACCGCC CCCGCTGCTG GCGTGATCAG CGCCATTCAT
CGTGGTGAGA AGCGCGTCCT GCAATCCGTG GTCATCGACA TCGAAGGCGA CGAGCAGGAA
ACCTTCAGCC AGTACGCTGC CGACCAGCTC GACTCGCTGA GCGATGCCCA GGTTCGCGAG
AACCTGCAGC AGTCCGGCCT TTGGACCGCG CTGCGCACCC GTCCGTTCAG CAAGGTGCCG
GCGCTCGACG CCGTACCGAG TTCGATCTTC GTCACTGCCA TCGATACTCA CCCGCTCGCC
GCCGATCCGG CGGTGATCAT CGGTGAACAC GCCGCTGACT TCGAAAATGG TCTGAAGGTG
CTGGGCAACC TGGCCAAGGT CTTCCTGTGC AAGGCCGAAG GTGTCAGCCT GCCGGGCGAG
AATGTAGCCA AGGTGCACAG CGAAGCCTTT GCCGGCCCGC ACCCGGCAGG TCTGCCGGGC
ACCCATATTC ACTTCCTCGA CCCGGTCAGC GTCAGCAAGA GCGTATGGCA GATCGGCTAT
CAGGACGTGA TCGCCGTGGG CAAGCTGTTC ACCACGGGCC AGCTGTTCGT CGAGCGCGTG
GTTGCGCTGG GTGGTCCGGT CGTGGAGCAG CCGCGTCTGC TGCGTACCCG TCTGGGCGCC
AGCCTGGAAG AACTCACCGC CGGGGAGCTC AAGCCTGGCT TCAACCGCGT GGTTTCCGGT
TCGGTGTTCG GCGGTCGTAC CGCTCAGGGC GCATTCGCCT TCCTCGGTCG CTACCACAAC
CAGGTGTCCT GCCTGAGCGA GGGTAACGAG CGCGAGATGA TGCATTACCT GCGTGCCGGC
GTTAACAAGC ACTCGGTACT GAACATCTTC GTCTCCAAGC TGGCCGGCTC CAAGCTGTTC
AACTTCACCA CCACCACCAA CGGCAGCCCG CGCGCCATGG TGCCGGTGGG TAACTACGAA
GCAGTGATGC CACTGGACAT CCTGCCGACT CAACTCTTGC GCTACCTGAT CGTCGGTGAC
ACCGAGATGG CCCAGAAGCT GGGTTGCCTG GAGCTCGACG AAGAAGACCT GGCGCTGTGC
ACCTACGTGT GTGCCGGCAA ATATGAATAC GGCCCGATCC TGCGGGACAA CCTCACCCGC
ATCGAGAAGG AGGGTTAA
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| Protein sequence | MIKLKHGLDL PITGAPAQRI EAARPVRSVA VIGFDYHGMK PTMEVQVGDR VKLGQLLFTD
KKTPGVRYTA PAAGVISAIH RGEKRVLQSV VIDIEGDEQE TFSQYAADQL DSLSDAQVRE
NLQQSGLWTA LRTRPFSKVP ALDAVPSSIF VTAIDTHPLA ADPAVIIGEH AADFENGLKV
LGNLAKVFLC KAEGVSLPGE NVAKVHSEAF AGPHPAGLPG THIHFLDPVS VSKSVWQIGY
QDVIAVGKLF TTGQLFVERV VALGGPVVEQ PRLLRTRLGA SLEELTAGEL KPGFNRVVSG
SVFGGRTAQG AFAFLGRYHN QVSCLSEGNE REMMHYLRAG VNKHSVLNIF VSKLAGSKLF
NFTTTTNGSP RAMVPVGNYE AVMPLDILPT QLLRYLIVGD TEMAQKLGCL ELDEEDLALC
TYVCAGKYEY GPILRDNLTR IEKEG
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