| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1588 |
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| Symbol | |
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| ID | 5109246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1751264 |
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| End bp | 1751971 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502816 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001187084 |
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| Protein GI | 146306619 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.472704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGT CGGAAACCGT TGAACGCATT CTCGATGCTG CGGAACAGCT GTTCGCGGAA
AAAGGCTTCG CCGAAACCTC GTTGCGGCTG ATCACCAGCA AGGCCGGCGT CAATCTGGCT
GCGGTCAACT ATCACTTCGG CTCGAAGAAG GCGCTGATCC AGGCGGTCTT CTCGCGCTTC
CTCGGGCCCT TCTGCGCCAG TCTGGAAAAG GAACTCGACC GTCGTCAGGC CAAGACCGAC
ACGCAGGCCA CCCTCGAAGA ACTCCTCGAA CTGCTGGTCG AGCAGGCGCT GGCGGTCAAG
CCGCGTAGCG GCAACGACCT GTCCATCTTC ATGCGCCTGC TCGGCCTGGC GTTCAGTCAG
AGCCAGGGGC ACCTGCGCAA GTATCTGGAG GAGGTGTACG GCAAGGTGTT CCGCCGCTAC
ATGCTCCTCG TGCACGATGC CGCCCCGCGC ATTCCGCCGC TGGAACTGTT CTGGCGCGTG
CATTTCATGC TCGGCGCCGC GGCGTTCAGC ATGTCCGGCA TCAAGGCCCT GCGCGCCATG
GCCGAGACCG ATTTCGGCGT CAACACCTCG ATCGAGCAGG TGATGCGCAT GATGGTGCCT
TTCCTGGCCG CCGGCATGCG CGCCGAAACC GGTGTCAACG ATCCCTCGCT GGCGGCCGCG
CAACTCAAAC CGCGCAGCAA GGCGCCAAGC GCTCCGGCCA AGGTCTGA
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| Protein sequence | MAQSETVERI LDAAEQLFAE KGFAETSLRL ITSKAGVNLA AVNYHFGSKK ALIQAVFSRF
LGPFCASLEK ELDRRQAKTD TQATLEELLE LLVEQALAVK PRSGNDLSIF MRLLGLAFSQ
SQGHLRKYLE EVYGKVFRRY MLLVHDAAPR IPPLELFWRV HFMLGAAAFS MSGIKALRAM
AETDFGVNTS IEQVMRMMVP FLAAGMRAET GVNDPSLAAA QLKPRSKAPS APAKV
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