| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1587 |
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| Symbol | |
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| ID | 5109245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1750421 |
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| End bp | 1751035 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502815 |
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| Product | LexA repressor |
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| Protein accession | YP_001187083 |
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| Protein GI | 146306618 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.477026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAAAC TGACGCCACG CCAAGCCGAG ATTCTCGCCT TCATCAAACG CTGCCTGGAA
GACAACGGCT ATCCGCCCAC TCGGGCCGAA ATCGCCCAGG AGCTGGGTTT CAAATCGCCC
AACGCGGCAG AGGAGCACCT CAAGGCGCTG GCGCGCAAAG GGGCCATCGA AATGACGCCC
GGCGCCTCGC GCGGCATTCG CATCCCGGGC TTCGAGCCAG GTGCAGCCAA CGAGGACGAA
GGCCTTCCAG TGATCGGACG CGTGGCCGCA GGGGCTCCCA TTCTCGCCCA GCAGCATGTC
GAGGAATCCT GCCAGATCAA TCCTGCGTTC TTTCACCCCA AAGCCGACTA TCTGCTACGC
GTGCGCGGCA TGAGCATGAA GGACATCGGC ATCTTCGACG GCGACCTGCT GGCCGTGCAC
ACCACGCGCG AAGCGCGCAA CGGCCAGATC GTGGTCGCCC GCCTCGACGA CGAGGTCACG
GTCAAGCGCT TCAAGCGCGA GGGCAACAAG GTCTGGCTGA TCGCCGAAAA CCCCGAGTTC
GCCCCGATCG AAGTGGATCT GGAGCAGCAG GATCTGGTCA TCGAAGGTTT GAGTGTCGGT
GTAATTCGCC GCTGA
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| Protein sequence | MLKLTPRQAE ILAFIKRCLE DNGYPPTRAE IAQELGFKSP NAAEEHLKAL ARKGAIEMTP
GASRGIRIPG FEPGAANEDE GLPVIGRVAA GAPILAQQHV EESCQINPAF FHPKADYLLR
VRGMSMKDIG IFDGDLLAVH TTREARNGQI VVARLDDEVT VKRFKREGNK VWLIAENPEF
APIEVDLEQQ DLVIEGLSVG VIRR
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