| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1579 |
|---|
| Symbol | |
|---|
| ID | 5109237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 1741214 |
|---|
| End bp | 1742035 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640502807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001187075 |
|---|
| Protein GI | 146306610 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.287753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.662374 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAGCC GCCGTTCGCT TGCATTGCCC CTGAGCGCCC TGCTCGCTTT CCTCTTCACT
TTGCTTTCCT CTCCCTTGCT CCGCGCCGCG CCGGCCGATG ACCTGCTGCG CCTGCATCAA
CTGCGCCTGG CGGCTCAGAA AAGCCTGGGT GACTTCTATA TGTACAACGG CATGGAGGGC
GATCAGCGCT ATGCGCGGAT GATCGGGGAA TCCATGCAGC GAGCCCAAGG TCACCTCGAT
GCACTCGAGC AGATGCCCGG CGATGCCAGC CGTGCGCTGC AGGGGCAACT GCGAAGCACC
TGGCAGAGCT ATCGCGACGG ACTCCAGGGC CTGATGGACG CTATGCGCAG CCAGGGCTTC
ACCGACTTGC AGCCGGTGGC CGACCTTGCG GACAACAATC AGCGCCTCAT GGCTATTAGT
CAGGAGCTGT ATCAGAAGAT TCAGCAGGAA AGCGGTCAGA GCGTCCCGCC CTTGACGCAG
AAGAGCCGTG AGCAGAGCCT GCTGATGCAG AGCATCTCAG TGGACTATGC TTCGCGCAGT
GCCTCGGTCG GCACCAGCTT CTTCGGTGGC GGTGAAGAGC GCGCCATGGA CGAACTGGTC
GGTGAGTTCG CCAGCAAGCT CGACAGCCTC AGTGCAGCCC AGCAGAACAC GCCGCAGATC
ACAGCTGCCC TGGGCTCCAT CGAGACCAAG TGGCGCTACA TCGAGAAGTC GCTGCGCAAT
TACAACGAGA ACACCGTACC CTTTTTGGTA AGCAAGTATT CCGACAGCAT CATCGAAGGC
CTGGAAGGCG TGTCTGCCCA GTACGCCGCC AACCAACAGT GA
|
|---|
| Protein sequence | MPSRRSLALP LSALLAFLFT LLSSPLLRAA PADDLLRLHQ LRLAAQKSLG DFYMYNGMEG
DQRYARMIGE SMQRAQGHLD ALEQMPGDAS RALQGQLRST WQSYRDGLQG LMDAMRSQGF
TDLQPVADLA DNNQRLMAIS QELYQKIQQE SGQSVPPLTQ KSREQSLLMQ SISVDYASRS
ASVGTSFFGG GEERAMDELV GEFASKLDSL SAAQQNTPQI TAALGSIETK WRYIEKSLRN
YNENTVPFLV SKYSDSIIEG LEGVSAQYAA NQQ
|
|---|
| |