| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1578 |
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| Symbol | |
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| ID | 5109236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1740613 |
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| End bp | 1741062 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502806 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001187074 |
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| Protein GI | 146306609 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.492793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.782631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCTACC AGCACATTCT GGTCGCTGTC GACCTCACCG ATGAATGCGA CCCCGTAGTG
GTTCGCGCAC AGAAGCTGGC CAAGGCCAGC GGTGCCAAGA TGTCCCTGGT GCATATCGTC
GAACCCATGG CCATGGCCTT TGGTGGCGAC GTACCGATGG ACCTGTCGAT GTTGCAGCAA
CAGCAGTTCG AACAGGCGCG GGAACGCCTG GACAGCTTTA CCGGCAAGTA CCAGGAACTC
AGCGCGGACC AGCGCCATCT GGCCTATGGG CAGCCACGTC AGGAAATCCA CCGCCTCGCC
GAAGAACAGG GCTGCGATCT GATCGTGGTC GGCAGCCATG GCCGGCACGG TCTCGCGCTG
CTGCTGGGCT CCACCGCCAA TGACGTGCTG CATGGCGCGC CCTGCGATGT GCTCGCCGTG
CGTCTGAAGA AAGGCGAAAA AGGCGCTTGA
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| Protein sequence | MPYQHILVAV DLTDECDPVV VRAQKLAKAS GAKMSLVHIV EPMAMAFGGD VPMDLSMLQQ
QQFEQARERL DSFTGKYQEL SADQRHLAYG QPRQEIHRLA EEQGCDLIVV GSHGRHGLAL
LLGSTANDVL HGAPCDVLAV RLKKGEKGA
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