Gene Pmen_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1573 
Symbol 
ID5109231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1732647 
End bp1733453 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID640502801 
ProductMOSC domain-containing protein 
Protein accessionYP_001187069 
Protein GI146306604 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTC TCTCGGGGTT GTACCGTTAC CCGCTCAAGT CCGGCCGCGG TGAAGCGCTG 
CAGCGCAGTG CGGTCGATGG TCTGGGCCTG CATGGTGATC GCCGCTGGAT GGTGGTCGAT
GCCGATAGCG GACGTTTCAT CACCCAGCGC CTGCTACCGC AGATGAGTCA GCTGAGTGCC
CGCTACGATG CGCGCGGCGG CCTGACCCTG AGCGCTCCCG GCCAGGCCGA TCTGGCCGTC
GCCTTGCCCG ATCCCGAGCA GGATCTGCGC GGCGTCGTCG TCTGGCGTGA CAGCTTGCGC
GTGCCGGATG CCGGTGACGA GGCCGCCGAA TGGCTCAGCA CGATGCTCGG CAAACCGTGC
CGCCTGGTGC ATGTACCGGA GGGGCGTGCG CGCCAGGTCG ATACCGCTTA TGCCCAGCCG
GGTGATCGGG TGGCGTTTGC CGATGGTTTT CCGCTGCTGC TGATTGGCCA GGCCTCGCTG
GACGACCTTT CGCAACGTGT CGGGCAACCC CTGTCCATGC AGCGTTTTCG TCCCAACCTG
GTGGTCACCG GCAGCGAGGC GTATGCCGAG GATGGCTGGA AGCGCATCCG TATCGGCGAG
GTCGAGTTCG AGGTGGTCAA GGGGTGCTCA CGCTGCATCC TGACCACCAT CGACCCGCAG
ACCGGCGAGC GCAACGCTCA GCGTGAGCCG CTGGCCACGC TCAAGACCTA CCGGGAAAAG
GATGGGGACG TGTTCTTCGG GCAGAACCTG TTGCCGCGCG GCGTCGGCGA GCTGCAGCTG
GGGATGATGG TTGAGATATT GCAGTAG
 
Protein sequence
MPSLSGLYRY PLKSGRGEAL QRSAVDGLGL HGDRRWMVVD ADSGRFITQR LLPQMSQLSA 
RYDARGGLTL SAPGQADLAV ALPDPEQDLR GVVVWRDSLR VPDAGDEAAE WLSTMLGKPC
RLVHVPEGRA RQVDTAYAQP GDRVAFADGF PLLLIGQASL DDLSQRVGQP LSMQRFRPNL
VVTGSEAYAE DGWKRIRIGE VEFEVVKGCS RCILTTIDPQ TGERNAQREP LATLKTYREK
DGDVFFGQNL LPRGVGELQL GMMVEILQ