Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1570 |
Symbol | |
ID | 5109228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1729827 |
End bp | 1730192 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640502798 |
Product | response regulator receiver protein |
Protein accession | YP_001187066 |
Protein GI | 146306601 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.945276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA CCATTCTGAT AGTCGACGAC TCCCTCTCCA TGCGTCAGCT GGTGAAGATG ACCCTTTCCG GCGCCGGCCA CACCGTCATC GAGGCGGTGG ACGGGCGCGA CGCCCTGAGC AAGCTCAACG GACAGAAGAT CAACCTGATC ATCAGCGACG TGAACATGCC CAACCTCGAC GGCATCGGCC TGGTCAAGGA AGTGAAGGCG CGCAACGAAT ACCGCTTCAC CCCCATCGTC ATGCTCACCA CCGAGAGCGA ACAGGGCAAG AAAGCCGAAG GCCAGGCCGC CGGTGCCAAG GCCTGGATCG TCAAGCCGTT CCAGCCGCAG CAACTGCTGG CGGCCGTCGA CAAGCTGGCC AGCTGA
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Protein sequence | MAKTILIVDD SLSMRQLVKM TLSGAGHTVI EAVDGRDALS KLNGQKINLI ISDVNMPNLD GIGLVKEVKA RNEYRFTPIV MLTTESEQGK KAEGQAAGAK AWIVKPFQPQ QLLAAVDKLA S
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