| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1564 |
|---|
| Symbol | |
|---|
| ID | 5109222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 1723190 |
|---|
| End bp | 1724257 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640502792 |
|---|
| Product | response regulator receiver modulated CheB methylesterase |
|---|
| Protein accession | YP_001187060 |
|---|
| Protein GI | 146306595 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.736792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.583275 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGCG CCGCACAGAT CAAGGTATTC ATCGTCGACG ACTCGGCACT GGTGCGTCAG
GTGCTGACGG CCTGCCTGGA AAGCCATCCG GGCATCGAGG TGATCGGCCA GGCCGCCGAC
CCGCTGTTCG CCCTGGAAAA GATGCACAGG CAATGGCCCG ACGTGCTGGT GCTGGACGTG
GAAATGCCGC GCATGGACGG CATCACCTTC CTGCGCAAGA TCATGGCCGA ACGGCCGACG
CCGGCGATCA TCTGCTCCAC CCTCACCGAG GCCGGCGCCG CGGTGACCCT GGATGCACTG
GCCGCCGGCG CGGTGGGCGT GTTCACCAAG GCCAGGCTGG GCCTGCGCGA AAGCCTGCAG
CAGATGTCCG GCGATCTGAT CCGGCAGATC GAGATCGCCG CCCGCAGCCA GCCGCGGGCC
ATGCCGCGCA AGGCCGGGGA AACGGCACCC GTCGCGCCGG CAAAAAGCGA GCGCGCGCCG
GCGGTGCACC TGACCACCAC CGACCGCGTG GTGGCGCTGG GCACCTCCAC CGGCGGCACC
CAGGCCCTGG AGGTGGTGCT GCGCCAACTG CCGGTGGATT GCCCCGGCAT CGTCATCGTC
CAGCACATGC CGGAGAAGTT CACCGCCGCC TTCGCCCAGC GTCTGGACAG CGTCTGCGCC
ATCGAAGTGC GCGAGGCGCG GCATATGGAC CGCGTGCGCC CCGGCCTGGC ACTGGTGGCG
CCGGGCGGCC GCCACATGCA GCTCAAGCGC AGCGGCGCGC AATACTTCGT CGAAGTGCTC
GACGGCCCGC CGGTCAACCG TCACCGTCCG TCGGTGGACG TGCTGTTCCG CTCGGTGGCC
CGGCATGCCG GGCACAACGC GCTGGGGGTG ATCATGACCG GCATGGGCGA CGATGGCGCC
CGCGGCCTGC TCAGCATGCG CGAAGCCGGC GCACGCACCG TGGCCCAGGA CGAGGCCAGC
TGCGTGGTCT TCGGCATGCC CAAGGAGGCC CTGCGCCTGG GTGCGGCGCA AGGCACCGAA
TCCTTGCAGG GCATACCGCG CTTGATCGAG CAGTACGGGC GTGGCTGA
|
|---|
| Protein sequence | MPSAAQIKVF IVDDSALVRQ VLTACLESHP GIEVIGQAAD PLFALEKMHR QWPDVLVLDV
EMPRMDGITF LRKIMAERPT PAIICSTLTE AGAAVTLDAL AAGAVGVFTK ARLGLRESLQ
QMSGDLIRQI EIAARSQPRA MPRKAGETAP VAPAKSERAP AVHLTTTDRV VALGTSTGGT
QALEVVLRQL PVDCPGIVIV QHMPEKFTAA FAQRLDSVCA IEVREARHMD RVRPGLALVA
PGGRHMQLKR SGAQYFVEVL DGPPVNRHRP SVDVLFRSVA RHAGHNALGV IMTGMGDDGA
RGLLSMREAG ARTVAQDEAS CVVFGMPKEA LRLGAAQGTE SLQGIPRLIE QYGRG
|
|---|
| |