Gene Pmen_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1549 
Symbol 
ID5108499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1708956 
End bp1709315 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content59% 
IMG OID640502777 
ProductIS66 Orf2 family protein 
Protein accessionYP_001187045 
Protein GI146306580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.555012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.67903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTC CCGACGCCAA GGTGCAGAAG GTCTACCTCT ACCCAAAACC CGTCGATTTC 
CGCAAATCCA TCAACGGCCT GGCCGCTCTG GTCGAGCTGG ACATCAAGGT GGAAGTGTTC
AACCCCGTGC TGTTCGTGTT CCTCAACCGC ACCCGCAGTC AGGTCAAGAT CCTCTACTGG
GAGCGCAATG GCTTCTGCCT GTGGCTCAAG CGTTTGGAAG CCGAACGCTT CAAGACCAAG
CCCGATGCCG GCGACGAGGC CATCGAGCTG ACGGTCGATG AGTTGAACTG GCTGCTCGAC
GGCATCGACC TGTGGCGCAA CCGTCCGCAC CAGATACTGA CGCCGCGTTT CGTGACCTGA
 
Protein sequence
MMRPDAKVQK VYLYPKPVDF RKSINGLAAL VELDIKVEVF NPVLFVFLNR TRSQVKILYW 
ERNGFCLWLK RLEAERFKTK PDAGDEAIEL TVDELNWLLD GIDLWRNRPH QILTPRFVT