| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1548 |
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| Symbol | |
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| ID | 5108498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1707374 |
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| End bp | 1708936 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502776 |
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| Product | transposase IS66 |
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| Protein accession | YP_001187044 |
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| Protein GI | 146306579 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.446339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCG TGCCCGCCCC CCTTCCTGAC GACCCAATCC TGCTCAAGCA TTTACTGCTG
CTGGCCAGTG AACAGGCGGC TGCGAAAGAT GCTCGCATAG AACAACTTCA GGAACAGGTC
GCCCTGCTGC GCCACAAGTT GTTCTCGCCC AAGTCCGAGC GCAGCCCTGA AGACGCCGAC
TCACCGCAGT TGGCCATGTT CAACGAGGTC GAAGAGCTGA TCGAAGCGGC CGCTGCGCCA
AGCGAAGCCG AAGCCGAAGC CGAAGCCGAA GCCGAAGAAA TCGTTGCGCC GGTCAAGCGC
CGTGGCAAGC GCAAGCCGTT GCCGGCCAAC CTGCCGCGTG TCGAAGTCAT CCACGACCTG
CCCGAGCACG AGCTGACTTG CGCCTGTGGC GCCTGCAAAC AAGTCATCGG CGAGGAGACC
AGCGAACAGC TGGAGATTAT CCCGATGCAG GTGCGGGTCA TCCGCCATAT CCGCAAGACC
TACGCCTGCA AGGCCTGCGA AGCGGCGCCG CTCACTGCCG ACAAGCCGGC CCAACTGATC
GAGAAGAGCC TGGCCAGCCC CAGCGTGTTG GCCATGCTGC TGACCACCAA GTACGCCGAC
GGCATCCCGC TGTACCGCTT CGAGAAGATG CTCAGCCGCC ACGGCGTCGA CATACCACGC
CAGACCCTGG CGCGCTGGGT GATCCAGAGC GGTGAACAGC TGCAACCGCT GCTCAACCTG
CTGCGCGACA AGCTGCTCGA ATACCCCGTT TTGCACTGCG ACGAAACGCG CCTGCAGGTG
CTGCATGAAC CGGGACGCGA TCCCACCGCG CAGTCCTGGA TGTGGGTACA AAGCGGTGGA
CCACCGGATA AGCCGGTGAT CCTCTTCGAC TACACCGCCA GCCGCGCGCA GGAGGTGCCG
CTGCGCTTGC TCGACGGCTA TCGCGGCTAC CTGATGACCG ACGACTACGC CGGCTACAAC
GCCGTGGCCG CGCAAGAAGG CATCGAACGC CTCGGCTGCT GGGCGCATGC GCGGCGCAAG
TTCGTCGAGG CGCAGAAAGT GCAACCCAAG GGCAAAACCG GCCGTGCCGA CATGGCGCTG
AACCTGATCA ACAAGCTCTA CGGCATCGAG CGTGACCTGA AGGACGCCTG CGATACCGAG
CGCCTGGTCG CCCGTCAGCA ACGCAGCCAG CCGCTGCTCG ATCAACTCAA GACCTGGCTG
GACAAGACCC AGCCGCAGGT CGTCGGGCAG ACGGCGCTGG GCAGGGCGGT GAACTACCTG
GCCAGCAACT GGAGAAAGCT GGTGCGCTAC GTCGAAGGTG GACATCTGCC GATCGACAAC
AACCGCGCGG AGAACGCCAT CCGCCCGTTC GTTATCGGGC GCAAGAACTG GCTGTTCAGC
GACACGCCCA AGGGGGCCAC GGCCAGCGCA CAGATCTACA GCCTGATCGA AACCGCCAAG
GCCAATGGCC AGGAGCCTTA CGCCTGGCTG CGCCACATCC TCGAACGCCT GCCGGCCGCC
AATAGCGTCG AGGATTACGA AGCGCTGCTG CCGTGGAATT GCTCGCCAGT GAGCGCATCC
TGA
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| Protein sequence | MIAVPAPLPD DPILLKHLLL LASEQAAAKD ARIEQLQEQV ALLRHKLFSP KSERSPEDAD
SPQLAMFNEV EELIEAAAAP SEAEAEAEAE AEEIVAPVKR RGKRKPLPAN LPRVEVIHDL
PEHELTCACG ACKQVIGEET SEQLEIIPMQ VRVIRHIRKT YACKACEAAP LTADKPAQLI
EKSLASPSVL AMLLTTKYAD GIPLYRFEKM LSRHGVDIPR QTLARWVIQS GEQLQPLLNL
LRDKLLEYPV LHCDETRLQV LHEPGRDPTA QSWMWVQSGG PPDKPVILFD YTASRAQEVP
LRLLDGYRGY LMTDDYAGYN AVAAQEGIER LGCWAHARRK FVEAQKVQPK GKTGRADMAL
NLINKLYGIE RDLKDACDTE RLVARQQRSQ PLLDQLKTWL DKTQPQVVGQ TALGRAVNYL
ASNWRKLVRY VEGGHLPIDN NRAENAIRPF VIGRKNWLFS DTPKGATASA QIYSLIETAK
ANGQEPYAWL RHILERLPAA NSVEDYEALL PWNCSPVSAS
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