| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1544 |
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| Symbol | |
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| ID | 5108494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1703558 |
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| End bp | 1705168 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502772 |
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| Product | glutamate synthase (NADPH) |
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| Protein accession | YP_001187040 |
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| Protein GI | 146306575 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.443083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.726905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT CGCTACTCAG CCGCTACGCG TTCTTCGTCT TCTGTGTGCT GTTCACGCTG
GCCAGCCTGC CCTTTCTCCA TCATCAATGG CTGTGGCCGT TCGCCTTGCT CACGGGCGCG
CTCAGCCTGA TCGGTATCGG CGACCTGCTG CAGAAGCGTC AGGCGGTCAG GCGCAACTAC
CCGATCCTGG GCAATATCCG TTACCTGGTC GAAGGCATCC GCCCGGAGAT TCGCCAGTAT
CTGCTCGAAG GTGACGCCGA GCAGCTGCCC TTCTCCCGCG CCCAGCGCTC GCTGGTCTAT
GCCCGCGCCA AGAACGAGGG CGCCGACAAG CCCTTCGGCA CCCTGAGCGA CGTGTACCAG
AACGGCTTCG AGTTCATCAG CCACTCCATG CGTCCGGCGC CGCTGAGCGA CCCGTGCAGC
TTTCGCGTGG AGATTGGCGG GCCGCAGTGC AGCCAGCCGT ACTCGGCGTC GCTGTTCAAC
ATTTCGGCGA TGAGCTTCGG CTCGCTCAGC GCCAACGCCA TCCGCGCCCT GAACCAGGGC
GCCAAGCTCG GCGAGTTCTA TCACGACACC GGCGAGGGCA GCATCAGCCC CTACCACCGC
GAGCACGGCG GCGATCTGGT GTGGGAACTG GGCAGCGGCT ATTTCGGCTG CCGCGCCTCG
GACGGCCGCT TCGACCCCGA GCGCTTTGCC GTCCAGGCGG CCAGCCCGCA GGTGAAGATG
ATCGAGATCA AGCTCAGCCA GGGCGCCAAG CCGGGCCATG GCGGCATCCT GCCCAAGCAC
AAGGTCACCG AGGAAATCGC CAACACCCGC GGCGTACCCA TGGGTGAGGA CTGCATCTCG
CCCTCGCGCC ACAGCGCCTT CTCCACGCCG ACCGAGCTGC TGCAGTTCAT CGCCCAGCTG
CGCGAGCTGT CCGGCGGCAA GCCGGTGGGC TTCAAGTTCT GCCTGGGCCA CCCCTGGGAA
TTCATGGGCA TCGTCAAGGC CATGCTGCAG ACCGGCATCC TGCCCGATTT CATCGTCGTC
GACGGCAAGG AAGGCGGCAC CGGCGCGGCG CCGCTGGAGT TCACCGATCA CCTTGGCGTG
CCGCTGCGCG AAGGTCTGCT GTTCGTGCAC AACACCCTGG TCGGCAGCAA CCTGCGCGAC
AAGATCAAGC TCGGCGCCAG CGGCAAGATC GTCAGCGCCT TCGACATCGC CCGCGTGCTG
GCCATCGGCG CCGACTGGGC CAACTCGGCA CGCGGCTTCA TGTTCGCCAT CGGCTGCATC
CAGAGCCAAA GCTGCCATAC AAACAAGTGC CCCACCGGCG TGGCGACGCA GGACCCATTG
CGCCAGCGCG CTCTGGTGGT CGAGGACAAG GCCCAGCGCG TCTACAACTT CCACCGCAAC
ACACTCAAGG CGCTGGCCGA GATGCTCGCC GCTGCCGGCT TGGACCATCC CTCGCAGATC
GATGCCAAGC ACCTGGTGCA GCGCCTGTCG GCCACCGAGA TCAAGCTGTT CGCCCAGCAG
CATGTGTTCC TCGCGCCGGG CGAACTGCTC GGCGGCCAGA TCGAGGGCGA GTTCTACGAA
CGCATGTGGC GCATGGCCCG CGCCGACAGT TTCGAGCCGG CGCCGGCCTG A
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| Protein sequence | MNLSLLSRYA FFVFCVLFTL ASLPFLHHQW LWPFALLTGA LSLIGIGDLL QKRQAVRRNY
PILGNIRYLV EGIRPEIRQY LLEGDAEQLP FSRAQRSLVY ARAKNEGADK PFGTLSDVYQ
NGFEFISHSM RPAPLSDPCS FRVEIGGPQC SQPYSASLFN ISAMSFGSLS ANAIRALNQG
AKLGEFYHDT GEGSISPYHR EHGGDLVWEL GSGYFGCRAS DGRFDPERFA VQAASPQVKM
IEIKLSQGAK PGHGGILPKH KVTEEIANTR GVPMGEDCIS PSRHSAFSTP TELLQFIAQL
RELSGGKPVG FKFCLGHPWE FMGIVKAMLQ TGILPDFIVV DGKEGGTGAA PLEFTDHLGV
PLREGLLFVH NTLVGSNLRD KIKLGASGKI VSAFDIARVL AIGADWANSA RGFMFAIGCI
QSQSCHTNKC PTGVATQDPL RQRALVVEDK AQRVYNFHRN TLKALAEMLA AAGLDHPSQI
DAKHLVQRLS ATEIKLFAQQ HVFLAPGELL GGQIEGEFYE RMWRMARADS FEPAPA
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