Gene Pmen_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1541 
Symbol 
ID5108491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1701203 
End bp1701769 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID640502769 
Productnicotinamide mononucleotide transporter PnuC 
Protein accessionYP_001187037 
Protein GI146306572 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3201] Nicotinamide mononucleotide transporter 
TIGRFAM ID[TIGR01528] nicotinamide mononucleotide transporter PnuC 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.732675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCGT CGCTGGAGAT TTTCGCCAAC CTCTTCTACC TGGTTTCGGT GCTGCTGGCG 
GCGCGCAACT CCGTGCATAC CTGGGCGGTC GGGCTGGTCG GTTGTGCGCT GTTCGGCTGG
CTGTTCTTCA GCGTGCAGTT GTATGCGGAC GTGACCTTGC AGGGCTTTTT CATCGCCACC
AGTCTGCTGG GGTGGTGGAG CTGGTTGCGT GGACGCGACG GTGACCCCAT GCCGATCAGC
CATACGGCTT GGCCGGGGCT GGCCCTGGCG CTTGGTTTGG CGGTGCTGGT GGCGCTGGCC
TACGGGGCCT TGCTGCATCA TTTCACCGAC GCCTACGCGC CCTTTATCGA TTCCCTGGTG
CTGACCTTCA GCGTGCTGGC GCAATTGCTG CTGATGCGCC GCAAGCTGGA GACCTGGTAC
GCCTGGCTAC TGGTCAACAC CCTGGCAGTG CCATTGTTCG CCTCGCGTGA GCTGTACCTG
ACCGCCTTCA TCTACCTGCT GTTCTGGTGC AATGCCTGGT ACGGCCTGTA TCGTTGGCGC
CGTGAACTGA ATGCGCAGGC GGCCTGA
 
Protein sequence
MPSSLEIFAN LFYLVSVLLA ARNSVHTWAV GLVGCALFGW LFFSVQLYAD VTLQGFFIAT 
SLLGWWSWLR GRDGDPMPIS HTAWPGLALA LGLAVLVALA YGALLHHFTD AYAPFIDSLV
LTFSVLAQLL LMRRKLETWY AWLLVNTLAV PLFASRELYL TAFIYLLFWC NAWYGLYRWR
RELNAQAA