Gene Pmen_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1533 
Symbol 
ID5108483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1694917 
End bp1695183 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content62% 
IMG OID640502761 
Producthypothetical protein 
Protein accessionYP_001187029 
Protein GI146306564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.555679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG CAGCCCTCAA CGCCACCGTT CTCGCCGTAT TCGCTCCCCT GGCCTTCGCC 
AGCGAAAAGG CGCCTGCCCA GTCCAAGGTG GAAGTACAGG AATACCAGTA CGGCATGCAG
CTGGACATCG ACCAAGTCCT GCAGCGCACC GACAACAGCC GCAAGAGCGG CGTGGTGCCC
AGCGTCATGG TCTACCGTGA CAGCCAGGGC GAAGTGCACG CCGTACGCTT CATGGAATGG
GGCGGGCTGA GCAGCCAGAA CGGTTGA
 
Protein sequence
MKFAALNATV LAVFAPLAFA SEKAPAQSKV EVQEYQYGMQ LDIDQVLQRT DNSRKSGVVP 
SVMVYRDSQG EVHAVRFMEW GGLSSQNG