| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1527 |
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| Symbol | |
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| ID | 5108477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1688594 |
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| End bp | 1689793 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502755 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001187023 |
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| Protein GI | 146306558 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0834146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.849966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACC CTGCCGCCAC TGCCGCGACC TCGCTGTCGC CTGGCGCGAT CCTTCTCATT
CAGCTCGCCC TGGCCCTCGG CGGCTTCGCC ATCGGCACCG GCGAGTTCGC CATCATGGGC
CTGATGCCCA ACGTCGCCGC CGACCTTGGC GTCAGCGAAC CGCAGGTCGG CCATGTGATC
AGCGCCTACG CCCTGGGCGT GGTGGTCGGC GCGCCGACCC TCGCCCTGCT CGGCGCACGC
CTGCCCAGGC GCGTCCTGCT TCTGCTGCTG ATGGGCTGCT TCGCCCTTGG CAACTTCGCC
AGCGCCCTGG CGCCGGGCTA CGAGCCGCTG CTGATCTTCC GCTTCATCGC CGGCCTGCCC
CACGGCGCCT ACTTCGGCAT CGCCATGCTG GTGGCCGCGT CCATGGCGCC GCCGCACAAA
CGCGCCAAGG CGGTGAGCCG GGTGCTGGCC GGCCTGACCG TGGCCATCCT GATCGGCAAC
CCGCTGGCCA CCTGGCTCGG CCAGTTCATG AGCTGGCGCT ACGCCTTCGC CCTGGTCGGC
ATCATCGCCA TCACCACCAT CGCCATGGTG GCGATCTTCC TGCCGGCCGA TCCCAACGAG
CAGCGCAGCA GCCCCAAGGG CGAGCTGCGC GCCTTCAACC GTGCGCCGAT CTGGCTGGCC
CTGGGCATCG GCGCCATCGG TTTCGCCGGC ATGTTCTGCG TGTTCAGCTA CATGGCGCCC
ACACTGCTGC ACGTCACCCA GGTCGGCCCC GGCTGGATTC CCCTGGCCAT GGGCGTGTTC
GGTGCCGGCT GCATCGTCGG CAACAGCGCC GGCGGCTGGC TGTTCGATCG CCTGCGCCTG
CGTGCCGTGG CCTGGATCCT GGCGTGGAGC ACCCTGGTGC TGCTGGTCTT CCCCTTCGCC
GCGCACAGCC TCTGGACCAT CCTGCCGGCG ATCTTCGCCA TCGGCACCAT GATCGCCCTC
GGCCCCGCAT TGCAGACCCA CCTGATGGAC GTCGCCACCG GCGCGCAGAC GCTGGCGGCC
GCCTCCAACC ACGCCGCGTT CAACCTCGCC AATGCCCTCG GCCCCTGGCT CGGCGGCCTG
GCCATCAGCG CCGGCATGAG CTGGACCGTC ACCGGCTATA TCGGCGCCAT CACCGCCATC
GCAGGCCTGG CGCTGTTCGC CTGGGCCTGG AAGGTGCAGC AGCGCAACGC GCGGAACTGA
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| Protein sequence | MNNPAATAAT SLSPGAILLI QLALALGGFA IGTGEFAIMG LMPNVAADLG VSEPQVGHVI
SAYALGVVVG APTLALLGAR LPRRVLLLLL MGCFALGNFA SALAPGYEPL LIFRFIAGLP
HGAYFGIAML VAASMAPPHK RAKAVSRVLA GLTVAILIGN PLATWLGQFM SWRYAFALVG
IIAITTIAMV AIFLPADPNE QRSSPKGELR AFNRAPIWLA LGIGAIGFAG MFCVFSYMAP
TLLHVTQVGP GWIPLAMGVF GAGCIVGNSA GGWLFDRLRL RAVAWILAWS TLVLLVFPFA
AHSLWTILPA IFAIGTMIAL GPALQTHLMD VATGAQTLAA ASNHAAFNLA NALGPWLGGL
AISAGMSWTV TGYIGAITAI AGLALFAWAW KVQQRNARN
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