| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1522 |
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| Symbol | |
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| ID | 5108472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1683299 |
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| End bp | 1684303 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502750 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001187018 |
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| Protein GI | 146306553 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.28403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.815852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA AAGTAGGCAT CAACGGTTTT GGCCGCATCG GCCGTCTGGC CCTGCGCGCC
GCCTGGAACT GGCCCGAGCT GGAGTTCGTG CAGATCAACG ACCCGGCTGG TGACGCCGCC
ACCCACGCGC ACCTGCTCAA TTTCGACTCG GTACACGGCC GCTGGCAGCA TGAGGCGGGC
AGCGACGGCG ATTGCGTGGT GATCGATGGC AAGCGCATCA AGGTGAGCGC CAACAAGGCC
ATCGCCGACA CCGACTGGAG CGGCTGCGAC CTGGTGCTCG AGGCCAGCGG CAAGATGAAG
ACGGTCGCCG TGCTGCAGGG TTATCTGGAC CAGGGCGTGA GGCGCGTGGT GGTCTGCGCG
CCGGTCAAGG AGCAGGGCGC GCTGAACGTG GTGATGGGCG TCAACCAGCA CCTGTTCGAC
CCGGCGCAGC ACCGCATCGT CACCGCCGCG TCCTGCACCA CCAACTGCCT GGCACCGGTG
GTCAAGGTGA TCCACGAGGC GCTGGGCATT CGTCACGGCT CGATCACCAC CATCCACGAC
CTGACCAACA CCCAGAGCAT CCTCGACCAA CCGCACAAGG ATCTGCGTCG CGCCCGCGCC
TCGGGTATGA GCCTGATTCC GACCACCACC GGTTCTGCCA CGGCGATTGC CGAGATCTTC
CCGGAGCTGC GCGGCAAGTT GAACGGCCAT GCCGTGCGCG TGCCGCTGGC CAACGCCTCG
CTGACCGACT GCGTGTTCGA GGTCGAGCGT GCCACCACCG CCGAGGAGGT CAACGCGCTG
CTCAAGGCGG CCGCCGAAGG GCCGCTGCAC GGCATCCTGG GCTATGAAGA GCGCCCGCTG
GTGTCCATCG ACTACCGCAC CGATCCGCGC TCGTCCATCG TCGATGCCCT GTCGACCCTG
GTGGTGGCCG GCACCCAGGT GAAGATCTAC GCCTGGTACG ACAACGAATG GGGCTATGCC
AACCGCGCGG TGGAGCTGGC GCGCCTGGTC GGCCAGGCCG GCTGA
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| Protein sequence | MSIKVGINGF GRIGRLALRA AWNWPELEFV QINDPAGDAA THAHLLNFDS VHGRWQHEAG
SDGDCVVIDG KRIKVSANKA IADTDWSGCD LVLEASGKMK TVAVLQGYLD QGVRRVVVCA
PVKEQGALNV VMGVNQHLFD PAQHRIVTAA SCTTNCLAPV VKVIHEALGI RHGSITTIHD
LTNTQSILDQ PHKDLRRARA SGMSLIPTTT GSATAIAEIF PELRGKLNGH AVRVPLANAS
LTDCVFEVER ATTAEEVNAL LKAAAEGPLH GILGYEERPL VSIDYRTDPR SSIVDALSTL
VVAGTQVKIY AWYDNEWGYA NRAVELARLV GQAG
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