Gene Pmen_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1520 
Symbol 
ID5108470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1682044 
End bp1682766 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID640502748 
ProductNADPH-dependent FMN reductase 
Protein accessionYP_001187016 
Protein GI146306551 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID[TIGR02690] arsenical resistance protein ArsH 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.85919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.965215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA TGCACGACGA CCTGCCCAAC ATTGATCGGC AACTGCTCGA TCTACCGACC 
TCGGACAAGC TCGCCATCGA GCCTGCCTCG ACCCATGCGC CGCGCATCCT GCTGCTGTAC
GGCTCCACCC GCGAGAAGTC CTTCAGCCGC CTGCTGACCG AGGAGGCCGC GCGCCTGTTG
CAGCGCTTCG GTGCCGAGAC GCGCATCTTC GACCCGCGCG GCCTGCCGCT GCCGGACGAT
GCGCCGGACA GCCATCCCAA GGTGCAGGAG CTGCGCGAGC TGATGCAGTG GTCGGAGGGC
CAGGTGTGGT GCTCGCCCGA ACGCCACGGC GCGATGACTG CCGTGTTCAA GGCGCAGATC
GACTGGGTGC CGCTGGCCAT GGGCGCGGTC CGCCCGACCC AGGGCAAGAC CCTGGCGGTG
ATGCAGGTCT GCGGCGGCTC GCAGTCGTTC AACGTGGTCA ATCAGCTGCG CGTGCTGGGG
CGCTGGATGC GCATGTTCAC CATCCCCAAC CAGTCCTCGG TGCCCAAGGC CTTCATGGAG
TTCGACGCGG AGGGCCGGAT GAAACCGTCC TCGTTCTACG ACCGCCTGGT GGACGTGATG
GAGGAACTGG TCAAGTTCAC CCTGCTGCTG CGCGACCGAT CCGACTACCT GGTCGATCGC
TACTCCGAGC GCAAGGAGTC GGCCGAAGAA CTGTCCAAGC GCGTCAATCA GCGCGCCCTC
TGA
 
Protein sequence
METMHDDLPN IDRQLLDLPT SDKLAIEPAS THAPRILLLY GSTREKSFSR LLTEEAARLL 
QRFGAETRIF DPRGLPLPDD APDSHPKVQE LRELMQWSEG QVWCSPERHG AMTAVFKAQI
DWVPLAMGAV RPTQGKTLAV MQVCGGSQSF NVVNQLRVLG RWMRMFTIPN QSSVPKAFME
FDAEGRMKPS SFYDRLVDVM EELVKFTLLL RDRSDYLVDR YSERKESAEE LSKRVNQRAL