Gene Pmen_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1518 
Symbol 
ID5108468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1679996 
End bp1681069 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content65% 
IMG OID640502746 
Productarsenical-resistance protein 
Protein accessionYP_001187014 
Protein GI146306549 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0898505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.894233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATG CGTGTGACAC CGCCCCTGCA GGCTCCACGG GCGCGCCCCT GGGCTTCTTC 
GAGCGTTACC TGAGCCTGTG GGTCTTTCTC TGCATCGCCG CGGGTACCGC GCTGGGTCTC
GTCGCCCCGC AAGCCGCACA GGCGGTCGGT GCGCTGGAAG TGGCGCAGGT GAATATCCCG
GTCGGCGTGC TGATCTGGGT GATGATCATC CCCATGCTGA TGAAGATCGA TTTCGCCTCG
CTGCATGAAG TGCGCGGGCA GAAAGCCGGC ATCGGCGTCA CCCTGTTCGT CAACTGGGTG
GTCAAGCCCT TCTCCATGGC CCTGATCGGC TGGCTGTTCA TCAAGATCCT GTTCGCCGAC
TGGCTGCCGG CCGATCAGCT CGACAGCTAC ATGGCCGGGC TGATCCTACT CGGCGCCGCG
CCCTGTACGG CGATGGTGTT CGTGTGGAGC AACCTGTGCA ACGGCAACGC CAACTTCACC
CTCAGCCAGG TGGCCCTCAA CGACCTGGTG ATGGTGTTCG CCTTCGCGCC CATCGTCGCC
CTGCTACTGG GCGTATCGTC GATCCCGGTG CCCTGGGACA CCCTGCTGCT GTCGGTGGTG
ATGTACATCG TCATCCCCTT GGCCATCGCC CAGGCGGTGC GCGCGCAGTT GCTCAAGCGC
GGCAAGCATG TCTTCGAGGC GGCCCTGGCC AGGATCGCCC CCTTCTCCAT CCTCGCCCTG
CTCGGCACCC TGGTGCTGCT GTTCTCCTTT CAGGGCCAGG CCATCGTCGC GCAGCCGCTG
GTCATCGGCA TCCTGGCCCT GCCGATCCTG CTGCAGACGC TGTTCATCGC AGCCCTGGGC
TACGCCCTCA ATCGCTCGCT GAAGGTGCGT CACGACGTGG CCGGCCCCTC GACCATGATC
GGCGCCTCCA ACTTCTTCGA GCTGGCCGTG GCGGTGGCCA TCGTGCTCTA TGGTTTCGAT
TCCGGCGCAG CGCTGGCCAC GGTCGTCGGC GTGCTGATCG AGGTGCCGGT GATGCTCTGG
CTGGTGCGCC TGGTCAACAA GAGCCGGCAT TGGTACGAAC GGGCGTTGCC GTAG
 
Protein sequence
MTNACDTAPA GSTGAPLGFF ERYLSLWVFL CIAAGTALGL VAPQAAQAVG ALEVAQVNIP 
VGVLIWVMII PMLMKIDFAS LHEVRGQKAG IGVTLFVNWV VKPFSMALIG WLFIKILFAD
WLPADQLDSY MAGLILLGAA PCTAMVFVWS NLCNGNANFT LSQVALNDLV MVFAFAPIVA
LLLGVSSIPV PWDTLLLSVV MYIVIPLAIA QAVRAQLLKR GKHVFEAALA RIAPFSILAL
LGTLVLLFSF QGQAIVAQPL VIGILALPIL LQTLFIAALG YALNRSLKVR HDVAGPSTMI
GASNFFELAV AVAIVLYGFD SGAALATVVG VLIEVPVMLW LVRLVNKSRH WYERALP