| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1508 |
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| Symbol | |
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| ID | 5108459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1667594 |
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| End bp | 1668190 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502737 |
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| Product | NADP oxidoreductase, coenzyme F420-dependent |
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| Protein accession | YP_001187005 |
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| Protein GI | 146306540 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.457968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.233351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATTG GAATAATTGG CGCCGGCGCC ATAGGCAGCG CCATCGCACG CGCCCTGAGC
AAGGCGGGTA TCGAAGTCTC CATCGCCAAT AGCCGAGGGC CGGACAGCTT GCAGAGCCTG
GCTGACGAAT TGGGGCCGAA GGTCATAGCG GTAAGCCGGG AGCAAGCCGC CCAGGCTGAC
ATCGTCTTTC TTGCGGTGAA TTGGTCGAGG ATTCCCGCCG CGCTAGAAAA TCTGCCTCCT
TGGAATGGGC GTATCGTGGT CGACACCAAC AACCCAATTG AGGCGCCGAC TTTTCGCCCT
TTCGATCTGG GCAGCGAGAC CTCTAGCGAA GTGGTTGCGC GGATGCTTCC TGGGGCGCGC
TTGGTCAAGG CATTCAATCA CCTGCAACCA GCGCAGCTGA GTGGCGATCC AACAGCCGAG
GGTGGCCGAA GGGTGCTGTT CTACTCAGGC GAGGATGCCG AGGCCAAGGC CGAAGTGGCG
AAGTTGATCG AGCGACTGGG TTTCGCCGGT ATCGACCTGG GTGGCCTAAG CGAAGGGCGC
CTGGCGCAGT TCCCTGGAGG GCCATTACCG GCAATTAACT TGGTGAAGCA CGGATGA
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| Protein sequence | MKIGIIGAGA IGSAIARALS KAGIEVSIAN SRGPDSLQSL ADELGPKVIA VSREQAAQAD
IVFLAVNWSR IPAALENLPP WNGRIVVDTN NPIEAPTFRP FDLGSETSSE VVARMLPGAR
LVKAFNHLQP AQLSGDPTAE GGRRVLFYSG EDAEAKAEVA KLIERLGFAG IDLGGLSEGR
LAQFPGGPLP AINLVKHG
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