Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1499 |
Symbol | |
ID | 5108450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1660628 |
End bp | 1661128 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640502728 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001186996 |
Protein GI | 146306531 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.364247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.593095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACC GTGCACAACT GGCTGCCAAT CAGTGGCAGC AACAGCGTCC CGACCTGGAT GGCTTCTCCA TGGCCGTGAT CGGGCGCCTG GGCGAACTCA GCCAGGTGAT CAGTCGAGAC CACCTGCTGC CGTTCTTCGC TGCACATGGC CTGCAGGCCG GCGAGTTCGA TCTGCTCGCC ACCCTGCGCC GCTCGGGCGA ACCCTATGCG TTGATGCCCA CCACCCTTTA CGAGAGCGCG ATGATTTCCT CGGGCGGCAT GACCAGCCGT ATAGACCGAC TGGAAAAGGC CGGGCTGATC GAGCGGCGCA AACACCCCAG CGACCGTCGT GGCGTGCTGG TGGCACTGAC GCCTGCCGGT TTCGATCTCA TCGATGGCAT GCTTGCCGCC CACGTCGCCA ACCTGCAGCG CGTGCTCTCA GGATTGACCG TCGACGAGCA GCAGACGTTG CATGAATTGA CTGGCAAGCT GCTGGTGGGC TTGGCTCAGC GAGATGAGTG A
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Protein sequence | MQDRAQLAAN QWQQQRPDLD GFSMAVIGRL GELSQVISRD HLLPFFAAHG LQAGEFDLLA TLRRSGEPYA LMPTTLYESA MISSGGMTSR IDRLEKAGLI ERRKHPSDRR GVLVALTPAG FDLIDGMLAA HVANLQRVLS GLTVDEQQTL HELTGKLLVG LAQRDE
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