| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1479 |
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| Symbol | |
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| ID | 5108430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1639440 |
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| End bp | 1640324 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502708 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186976 |
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| Protein GI | 146306511 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0277632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCA CCGCTCCGAC CGCCCTGCCG CTTCTGGAAA GCGATGTGCT GCGCACCTTC
GTCGCCATCG CCGACAGCGG CAGCTTTACC CGCACTGCCG CGCAGGTATT TCGCAGCACG
GCGGCGGTGA GCCTGCAGAT CAAGCGACTT GAGGAGACCC TCGGCCAGCG CCTGTTTATC
CGTGAGGCTC GACAGGTTCG CCTGACCGCC GAAGGCGAGG TGCTACTGGG CTACGCCCGG
CGCCTACTCA AGCTCAATGA AGAGGCGGTG GCAAATTTTC TCAAACCGGC GCTCAGCGGC
CGGGTCTGTC TGGGAATTCC GAACGATCTG AGCACCCGGG TGCTGCCCGG TGTGCTAACC
ACCTTCGCGC GCAGCCATCC GGCTGTGCAG GTGGACGTCT GTGTGGGGCG AAGCGTGGAG
CTGGTGGCGA AAGTGGATGC AGGCGAGCTG GATCTGACCC TGATCAATGC CGGCAACGAC
GGCCTGGATG ATGCCCGCGG CGAAGTGATC TATTCCGAGG AGCTGGTCTG GGCCGGGCGT
GACGGCGGCC TGGCCATACA GCGCTCGCCC CTGCCGCTGG CACTGGCCAA CCCCGGCTGC
GCCTGGCGCC GCACCGCGCT CGATGCTCTG GATCGTCAGG GTGTGGCCTA TCGTATTGCC
TACTCCTGCG AGCAGTGCGC CGGCCAGGAA GCGGCAATGA CCGCCGACCT GGCCATCGCG
CCCTTCCCGC GCAGCCTGGT CAAACCGCCA CTGCGCCGAC TCGGCGCGGA ACAGGGGCTG
CCGCCGCTGG GCGAATACCA CATCAAGCTG ATACGCGGTC ATCAGCGTAA CGAGGCTGTC
GAGGCCCTCG CTACGCAGAT GATCCAAGCC TTTGCGCAAG GCTAG
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| Protein sequence | MNATAPTALP LLESDVLRTF VAIADSGSFT RTAAQVFRST AAVSLQIKRL EETLGQRLFI
REARQVRLTA EGEVLLGYAR RLLKLNEEAV ANFLKPALSG RVCLGIPNDL STRVLPGVLT
TFARSHPAVQ VDVCVGRSVE LVAKVDAGEL DLTLINAGND GLDDARGEVI YSEELVWAGR
DGGLAIQRSP LPLALANPGC AWRRTALDAL DRQGVAYRIA YSCEQCAGQE AAMTADLAIA
PFPRSLVKPP LRRLGAEQGL PPLGEYHIKL IRGHQRNEAV EALATQMIQA FAQG
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