| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1476 |
|---|
| Symbol | era |
|---|
| ID | 5109765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1636951 |
|---|
| End bp | 1637850 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640502705 |
|---|
| Product | GTP-binding protein Era |
|---|
| Protein accession | YP_001186973 |
|---|
| Protein GI | 146306508 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.881887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATG CACCTGTGAG CCGCTGCGGC TATGTCGCCA TCGTCGGCCG CCCCAACGTG
GGCAAATCGA CGCTGCTCAA CCATATTCTC GGGCAGAAGC TGGCGATCAC CTCGCGCAAG
CCGCAGACCA CCCGGCACAA CATGCTCGGC ATCAAGACCG AGGGCGAGAT CCAGGCCGTC
TACGTCGACA CCCCCGGTCT GCACAAGCAC AACGACAAGG CGCTCAACCG CTACATGAAC
CGCAGCGCCT CCAGCGCACT GAAGGACGTC GACGTGGTGG TGTTCGTGGT CGACCGCACG
CGCTGGACCG ACGAGGATCA GCTGGTGCTG GAGAAGGTGC AGCACGTCAA ATGTCCGATC
CTGCTGGCGG TGAACAAGGC CGATCGCCTG GAAGACAAGA GCGAGCTGTT GCCGCATCTG
AACTGGCTGG CCGAGCAACT GCCGCAGGCC GAGATCGTGC CGATCTCCGC GCTGCAGGGG
CAGAACCTCG ACACCCTGGA GAAACTGGTG GGTGAGCGCC TGCCGGAGTC CGAGCATTTC
TATCCCGAAG ACCAGATCAC CGATCGCTCC AGTCGTTTCC TGGCTGCCGA GCTGATTCGC
GAGAAGATCA TGCGCCAGCT CGGCGCCGAG CTGCCCTACC AGATCACCGT GGAGATCGAG
GAGTTCAAGC AGGACGGCCC GATCCTGCAT ATCCACGGTC TGATCCTGGT GGAGCGTGAC
GGACAGAAGA AGATCATCAT CGGCGACAAG GGCGAGCGCA TCAAACGCAT CGGCCAGGAC
GCGCGCAAGG ACATGGAGAC CATGTTCGAC TCCAAGGTGA TGCTCAACCT CTGGGTCAAG
GTCAAGGGCG GCTGGTCCGA CGACGAACGC GCCCTGCGTT CGCTGGGTTA CCTGGATTGA
|
|---|
| Protein sequence | MTDAPVSRCG YVAIVGRPNV GKSTLLNHIL GQKLAITSRK PQTTRHNMLG IKTEGEIQAV
YVDTPGLHKH NDKALNRYMN RSASSALKDV DVVVFVVDRT RWTDEDQLVL EKVQHVKCPI
LLAVNKADRL EDKSELLPHL NWLAEQLPQA EIVPISALQG QNLDTLEKLV GERLPESEHF
YPEDQITDRS SRFLAAELIR EKIMRQLGAE LPYQITVEIE EFKQDGPILH IHGLILVERD
GQKKIIIGDK GERIKRIGQD ARKDMETMFD SKVMLNLWVK VKGGWSDDER ALRSLGYLD
|
|---|
| |