| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1463 |
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| Symbol | |
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| ID | 5109752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1625184 |
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| End bp | 1626125 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502692 |
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| Product | GcvT-like aminomethyltransferase |
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| Protein accession | YP_001186960 |
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| Protein GI | 146306495 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0953124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA GCGCGTATTT CACTCTCCTC GACCACGAAG GCCTGCTGGC CGTGCGCGGC
CCCGATGCCG GCAAGTTTCT CCAGGGCCAG TTGACCTGCA ACCTCAGCTA CCTTTCCGCC
AGCCAGACCA GTCTGGGCGC TCGCTGCACG CCCAAGGGCC GGATGCTGTC GAGCTTTCGC
ATCGTGCCGG TGGAAGACGG CTACCTGCTG GCCATGGCCC GCGAGCTGAT CGAACCGCAG
CTGGCCGACC TGCAGAAATA CGCAGTGTTC TCCAAATCCA AGCTCGGCGA CGAAAGCGCG
GCCTGGGTGC GCTTCGGCCT GAGCGGTGGC GACGCCGTGC TGAGCGAACT TGGCCTGGTC
CCGGGCGATC ACGCCGATGC CCTGGCCAGT GCCGAGGGTC TGCTGGCCGT GCGCCTTGGC
GACGGCCGCG TCGAACTCTG GGCAGCGGTG GACAAGGCCG AGCATCTGCA CGCCGTGCTA
AGCCGACATC TGCCCCAGGC GCCGCTGAAC CTCTGGCTGC TGGCCCAGGT GCGCGCCGGG
GTCGGTCAGG TGTTCGGCGC CACCCGCGAG CTGTTCATCC CGCAGATGAT CAACCTGCAG
GCCCTGGGTG GCGTGAGCTT CAAGAAAGGC TGCTACACCG GCCAGGAAAT CGTCGCGCGC
ATGCAATACC TGGGCAAACT CAAGCGCCGC CTGTATCGCC TGCGTCTGGG CGGCACCGAG
GTACCGTCTG CCGGCACCGA ACTGTTTTCC CCGGTACACG CCTCCAGCGT CGGTGAGGTG
GTACTGGCGG CACAGGCCGA AGATGGCGTG GAACTGCTCG CCGTTCTGCA GGAGGACGCC
GTCACCGACG GGCGCATCCA GCTCGGCAGC AGTGAAGGTC CGACACTTGC CCTGCTCGAC
CTGCCTTATC AGCTGGATGC CGACAAGGAA ATCCAGCGCT GA
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| Protein sequence | MADSAYFTLL DHEGLLAVRG PDAGKFLQGQ LTCNLSYLSA SQTSLGARCT PKGRMLSSFR
IVPVEDGYLL AMARELIEPQ LADLQKYAVF SKSKLGDESA AWVRFGLSGG DAVLSELGLV
PGDHADALAS AEGLLAVRLG DGRVELWAAV DKAEHLHAVL SRHLPQAPLN LWLLAQVRAG
VGQVFGATRE LFIPQMINLQ ALGGVSFKKG CYTGQEIVAR MQYLGKLKRR LYRLRLGGTE
VPSAGTELFS PVHASSVGEV VLAAQAEDGV ELLAVLQEDA VTDGRIQLGS SEGPTLALLD
LPYQLDADKE IQR
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