| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1461 |
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| Symbol | |
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| ID | 5109750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1623480 |
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| End bp | 1624235 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640502690 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001186958 |
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| Protein GI | 146306493 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.617285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCG CACTTCTCCT ATTCGTCCTG TTCTGCGGCA GCGCCCAGGC TGCCGACAGC
GTGCGGCTGA CCAACGGTGA ATGGCCACCC TACCTGGGCG AGCATCTGCC CCACCACGGC
GTCGCCTCGC GCATCGTCGC CGAAGCCTTC GCTCTGCAGG GCGTCAAGGT GCAGTGGGAG
TTCCACCCCT GGGCACGCTC GCTGAAGATG GCGGAAAGGG GCGAGCGCGA CGGCAGTGCG
GTATGGCTGC ACAACAGCGA GCGCGAACGG CTCTTCCATA TCAGCGACCC GGTGGTGGAG
AGCGGCTACT ATCTGTTTCA TCGCAAGACG CGCGACTTCG ACTGGACCAG CATCGAGGAC
CTGCGCGATC TGCGCATCGC CGCTACCCGC GGCTACGACT ACGGCGAGGC TTTCCAGCGC
GCCGAGGCAG CCGGCGAACT GCAGGTGGTG CGTCTGACCA ACGACGAACA GGGTTTTCGC
CAACTGCTGG CCGGGCGGGT CGACCTGTTC CCGATGGACA AGGTGGTTGG CTTCGACATG
CTCCACCGCC ACTTCAGCCC CGCCGAGCGA GCGCGCCTGA GCGTCCACCC GCACCCCTTG
CGTAGCGACA ACCTGCATCT GCTGCTGTCG CGCGAAGTCC CCGGCAACGC CGAACTCATC
GAACGCTTCA ACCGCGGCCT GGCGCAGCTA AGGGAAAGCG GCAAGGTGGC GCAATACCTG
CTGGAAATTC AGCAGCCGCT AACCCTCAGT CACTGA
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| Protein sequence | MRFALLLFVL FCGSAQAADS VRLTNGEWPP YLGEHLPHHG VASRIVAEAF ALQGVKVQWE
FHPWARSLKM AERGERDGSA VWLHNSERER LFHISDPVVE SGYYLFHRKT RDFDWTSIED
LRDLRIAATR GYDYGEAFQR AEAAGELQVV RLTNDEQGFR QLLAGRVDLF PMDKVVGFDM
LHRHFSPAER ARLSVHPHPL RSDNLHLLLS REVPGNAELI ERFNRGLAQL RESGKVAQYL
LEIQQPLTLS H
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