Gene Pmen_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1459 
Symbol 
ID5109748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1621432 
End bp1622103 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID640502688 
Producttwo component transcriptional regulator 
Protein accessionYP_001186956 
Protein GI146306491 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATTC TGCTGGTCGA AGACCACCCG CAATTGGCGG AAAGCGTGGC CCAGGCGCTG 
AAAGGCGCCG GCTGGACGGT GGACGTGCTG CATGACGGAG TGGCCGCCGA CCTGGCGCTG
TCCAGCGAGG ACTACGCCCT GGCGATTCTC GATATCGGAT TGCCCAGGCT GGACGGCTTC
GCCGTGCTGG CGCGCCTGCG CGACCGCGGC CAGCGCCTGC CGGTGCTGAT GCTGACCGCC
CGTGGCGAGG TCAAGGACCG CGTGCATGGC CTCAACCTCG GCGCCGATGA CTACCTGGCC
AAGCCCTTTG AACTCTCCGA ACTGGAGGCG CGGGTCAAGG CGCTGCTGCG TCGCAGCGTG
CTCGGCGGCG AGCAGCTGCA GCGCTGCGGC GATCTGGTCT ACGACCTCGG CGCGCGTCGC
TTCAGCATGA AGGGCGAGGC CCTGAGCCTG ACCGCCCGCG AGCAGGCGGT GCTGGAGGCG
ATGATCGCGC GGCCCGGACG GGTGATGAGC AAGGAGCAGT TGGCGGCCCA GGTGTTCGGC
CTGGATGAGG ACGCCAGCCC CGATGCCATC GAGATCTATA TCCATCGTCT GCGCAAGAAA
CTCGAGGGCA GCGGCGTGCG CATCGTTACC TTCCGCGGCC TGGGCTATCT GCTGGAGGCG
ATCGAGGCAT GA
 
Protein sequence
MRILLVEDHP QLAESVAQAL KGAGWTVDVL HDGVAADLAL SSEDYALAIL DIGLPRLDGF 
AVLARLRDRG QRLPVLMLTA RGEVKDRVHG LNLGADDYLA KPFELSELEA RVKALLRRSV
LGGEQLQRCG DLVYDLGARR FSMKGEALSL TAREQAVLEA MIARPGRVMS KEQLAAQVFG
LDEDASPDAI EIYIHRLRKK LEGSGVRIVT FRGLGYLLEA IEA