Gene Pmen_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1456 
Symbol 
ID5109745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1618382 
End bp1618825 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID640502685 
Producthypothetical protein 
Protein accessionYP_001186953 
Protein GI146306488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTTC GCCTGTTCTC CGCGATCTGG TTGCTGCTGT GCGTCTGGCT CGCCGTCCTT 
GCCTGGGGCT TCCAGGCGCC CTTCGCCTAT GACCCGGTCG GCCCGCGCGC CTATCCCCTG
CTGCTGCTGG CCCTGATGGG TGCCGGCAGC CTGTGGCTGA TGATCAAACC CGGCTTGCTC
GAGCAACGCC TGGACGTCCC CATGGCACTG CGCAGCGCCC TGTGCGTGGT GGTGCTGCTG
GCCTATGCGC TGACCTTCGA GCTGCTCGGC TTCGTCGTCA GCACCACCCT GGCCACCTTT
GCCCTCGGCC TGCTGTTCAC CGGCCGCCCG CTGCCGTGCG CCATCAGCGC CGTGGCGATG
GGCGTGCTGC TGTACAGCCT GTTCGACCTG TTGCTGGACG TGCCCCTGCC GCTCGGCCTG
TTAGACGCTT TCGTGGAGAG CTGA
 
Protein sequence
MYVRLFSAIW LLLCVWLAVL AWGFQAPFAY DPVGPRAYPL LLLALMGAGS LWLMIKPGLL 
EQRLDVPMAL RSALCVVVLL AYALTFELLG FVVSTTLATF ALGLLFTGRP LPCAISAVAM
GVLLYSLFDL LLDVPLPLGL LDAFVES