| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1451 |
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| Symbol | |
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| ID | 5109740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1612820 |
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| End bp | 1613827 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502680 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_001186948 |
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| Protein GI | 146306483 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.604829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACGAG TAGCCCTCAA CGGATACGGG CGCATCGGCC GCGCGCTGCT GCGCGCTCTG
GTGCAGCGTG ATCTGCAGCA GCGCATCCGC CTGATCGCCA TCAACGATCT CGGCGACCAC
GCCACCCTCA CCCACCTGAC CCGCTTCGAC TCCACCTTCG GTCGTTTCCC AGGCGAGGTG
GGACTGCAGG GCGAACAACT GCATGTGGCC GGCCAGGCTG TCCACCTGCT CAGCGAGCGC
GATGCCTTCA ACCTGCCGTG GAACCGCCTC GGGGTCGATC TGGTGCTGGA ATGTTCCGGC
AAGTTCAAGA AGCGCGAGCA GGTCGAACAG CACCTGACAG CCGGGGCGCA GCGGGTATTG
CTCTCGCACC CGCTGGAAAG CGCCGACCTG ACCGTGGTCT ATGGCGTCAA CCATGATCTG
CTGGCCAACC AGCAGATCGT CTCCAATGCC TCCTGCACCA CCAACTGCCT GGCCCCGCTG
GCCAAGGTGC TGCACGAGGC GGTGGGCATC CGCCAGGGTC TGGTCAATAC CGTGCACGCC
TACACCAACG ACCAGAATCT GCTGGACAAG GCCCACAGCG ATCTCTACCG CGCCCGCGCC
GCCGCATTGT CGATGATCCC CACTAGCACC GGCGCGGCGA AGACCATCGG CCTGGTGCTG
CCGGAACTGG CCGGGCGCCT CGACGGCCTG TCGGTGCGGG TGCCGACGCC CAATGTGTCG
CTGCTCGATC TGACCTTCAC CGCCGAACGC CCGACCAGCC GCGAGGCGAT CAACGCGGCA
TTGCAGGCCG GCGCTCGCGG CATGACCCCG GGCGTGATGG AATGCAACGA GCTGCCGTTG
GTCTCCAGCG ACTTCAACGC CTATCCGGTG TCCTGCGTGG TCGATCTCAA CCACACCCGG
GTGCAGGACG ATCTGGTCAA GGTGCTGGCC TGGTACGACA ACGAATGGGC CTTCGCCAAC
CGCATGCTCG ACGTGCTGCT GGCCTGGCCG CTGCCGCAGG CGGCCTGA
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| Protein sequence | MLRVALNGYG RIGRALLRAL VQRDLQQRIR LIAINDLGDH ATLTHLTRFD STFGRFPGEV
GLQGEQLHVA GQAVHLLSER DAFNLPWNRL GVDLVLECSG KFKKREQVEQ HLTAGAQRVL
LSHPLESADL TVVYGVNHDL LANQQIVSNA SCTTNCLAPL AKVLHEAVGI RQGLVNTVHA
YTNDQNLLDK AHSDLYRARA AALSMIPTST GAAKTIGLVL PELAGRLDGL SVRVPTPNVS
LLDLTFTAER PTSREAINAA LQAGARGMTP GVMECNELPL VSSDFNAYPV SCVVDLNHTR
VQDDLVKVLA WYDNEWAFAN RMLDVLLAWP LPQAA
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