Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1448 |
Symbol | |
ID | 5109737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1610211 |
End bp | 1610723 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640502677 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001186945 |
Protein GI | 146306480 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0935976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.790583 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGT TGCTCATGCG CCAGGCCGCC CGCGGGGATG TCGAGGCGCT CTGTGCGCTG CTCCTCGAGC ATGGGCCCAA CCCCTGGAAT CATCTGCCGG AGGCGGAGGT GCGCAGCCAT CTTGCAGCCA TCGCCGAGGG TGCGACGCTG GCGGTGCTGG CCGAGGAGCA GGGGCGCTTG CTGGGCTTCG TCAGCTATCG CCTGACCAGG GATTTCGCCG CCCATCAACC GCTGGCGCGT GCCGGGCACG TGCATGGCTA TATCTGCGAG GCGGTGGTGC ATCGCGACTG CGTCGGCCGC GGACTCGGCG CCCGTCTGCT GGGCGAGGCG GTGCAGGACC TCTGGCGCCT GGGCGTGCAC GACATCTATA TCGATCACCA CGAGGAGAAT GCCGCCTCGG CCGGGATGAT GCGCAAGGCC GGTTTCACCG AGCTGCTGAC CTACGCCGAC CCGGCGCGGC GGCCCAACGG CTCGGGGCGT TCGACGCTGT GCTGTCTGCG GGCTGGGCAA TGA
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Protein sequence | MSQLLMRQAA RGDVEALCAL LLEHGPNPWN HLPEAEVRSH LAAIAEGATL AVLAEEQGRL LGFVSYRLTR DFAAHQPLAR AGHVHGYICE AVVHRDCVGR GLGARLLGEA VQDLWRLGVH DIYIDHHEEN AASAGMMRKA GFTELLTYAD PARRPNGSGR STLCCLRAGQ
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