| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1439 |
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| Symbol | |
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| ID | 5109728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1601362 |
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| End bp | 1602504 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640502668 |
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| Product | glycerate kinase |
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| Protein accession | YP_001186936 |
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| Protein GI | 146306471 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1929] Glycerate kinase |
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| TIGRFAM ID | [TIGR00045] glycerate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.465286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG TCATCGCTCC CGACTCCTTC AAGGAGAGCC TCAGTGCGCC CGAGGTGGCT
GCAGCCATCG CGCGCGGCTG GCAGCGGGTG TTTCCCGAGG CCGAATGCCT GCTGCGACCC
ATGGCCGACG GCGGCGAAGG CACGGTGGAT GCGCTGCTCG CCGCGGTCGG TGGCGAGCGC
CGCGAGTGCT GGGTGCGCGG TCCCATGGGC GAGCCTGTGC GCGCCCACTG GGGCTGGCTG
GGGGAGGGCA CCGCGGTGAT CGAGATGGCC GCCGCCAGCG GTCTGCACTG GGTGCCGCGC
GAGCAGCGCG ATGCCCGTGT AGCCAGCAGT TTCGGTACTG GCGAGCTGAT CGCCGAGGCG
CTGCAGGCTG GCGCCACGCG CATCATCCTC GGCCTCGGCG GCAGCGCCAC CAACGATGCC
GGGGCCGGCT TGCTGCAGGC TCTGGGCATG CGCTTTCTCG ATGACCAGGG CCGAGAACTG
GCGGCAGGTG GCGCGGCACT GGCGGCGCTC GATCAGCTGG ATCTGAGCGG CCTGGATGCG
CGGCTGCTGC AGGTACAGAT CGAGGTTGCG GCAGACGTCG ACAACCCACT GTGTGGGGCG
CGCGGAGCCT CTGCGGTGTT CGGGCCGCAG AAGGGCGCCA CACCCGAGCA GGTTGCCGAG
CTGGATACGG CCCTCGGCCG TTTTGCACGC ATCGCCGCCG CGACCCTGGG CGAGGATCAT
GCCGAGTACC CCGGTGTCGG CGCGGCCGGA GGGTTGGGGT TTGCCGCACG CGCCTTCCTC
AAGGCCACCT TTCGCCCGGG TATCGAACTG GTGGCCGAGC TGTCCGGCCT GGCAGAGGCG
GTGCAGGGCG CCGATCTGGT GATCACCGGC GAGGGACGGA TGGATGCGCA GACCCTGCAC
GGCAAGACGC CGGTCGGTGT CGCGCGCGTC GCGCAGGATG CCGGCGTGCC GGTGATCGCC
CTGGCCGGCA GCCTGGGTGA GGACTATCAG GCGCTCTACG ATGCAGGTAT CGAGGCAGCC
TTCAGCCTGG CGCCGGGCCC GCTTTCGCTG GAGCAGGCCA TGGCCGCTGC GGCCGGTGAA
CTCGAGGCAC GCGCGGTGGA TATCGCCAGG CTGTGGCACC TGGCCCAGGC CGGCGCTCGT
TGA
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| Protein sequence | MKIVIAPDSF KESLSAPEVA AAIARGWQRV FPEAECLLRP MADGGEGTVD ALLAAVGGER
RECWVRGPMG EPVRAHWGWL GEGTAVIEMA AASGLHWVPR EQRDARVASS FGTGELIAEA
LQAGATRIIL GLGGSATNDA GAGLLQALGM RFLDDQGREL AAGGAALAAL DQLDLSGLDA
RLLQVQIEVA ADVDNPLCGA RGASAVFGPQ KGATPEQVAE LDTALGRFAR IAAATLGEDH
AEYPGVGAAG GLGFAARAFL KATFRPGIEL VAELSGLAEA VQGADLVITG EGRMDAQTLH
GKTPVGVARV AQDAGVPVIA LAGSLGEDYQ ALYDAGIEAA FSLAPGPLSL EQAMAAAAGE
LEARAVDIAR LWHLAQAGAR
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