| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1436 |
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| Symbol | |
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| ID | 5109725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1597908 |
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| End bp | 1598555 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502665 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001186933 |
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| Protein GI | 146306468 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA CGTTGGCCGA CATGCGCCGC GACTACACCC GCGACGGCCT GAGCGAAGCC
CAGGCCCCGC TGGATCCCTT TACCCTGTTT CGGCAGTGGT TCGATGATGC GGTGAAGACC
GAGCAGTTGC CGGTCGAGCC CAATGCCATG ACCCTGGCCA CGGTCGACGA GGACGGGCGC
CCGCACTGTC GGGTGTTGCT GCTCAAGGGT CTCGACGAGC GTGGCTTCAC CTTCTTCAGC
AACTATGAAA GCGCCAAGGG TCGCCAGCTG GCGGCGCGCC CCTATGCCGC GATGACCTTC
TTCTGGCCGA GCCTGGAGCG TCAGGTGCGT ATCGAAGGGC GGGTCGAGCG TGTCACGCCG
GCCGAGTCCG ATGGCTATTT CCAGGTGCGC CCGCTGGGCA GCCGCATCGG CGCCTGGGCC
TCGCCGCAGA GCCGGGTGAT CCGGGATCGC GCCGAGCTCG AGAATCTGCT GGCGGAAACC
GAGAAGCGCT TTCTCAATCA GGCCCCGCAC TGCCCACCCC ACTGGGGTGG CTATCGCCTG
CTGCCCGAGC GCATCGAGTT CTGGCAGGGG CGGCCGAGCC GCTTGCATGA CCGCCTCGAT
TACCGCCTGC AGGGCGAGGC CTGGATCCGT CAGCGCCTGG CGCCCTGA
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| Protein sequence | MTQTLADMRR DYTRDGLSEA QAPLDPFTLF RQWFDDAVKT EQLPVEPNAM TLATVDEDGR
PHCRVLLLKG LDERGFTFFS NYESAKGRQL AARPYAAMTF FWPSLERQVR IEGRVERVTP
AESDGYFQVR PLGSRIGAWA SPQSRVIRDR AELENLLAET EKRFLNQAPH CPPHWGGYRL
LPERIEFWQG RPSRLHDRLD YRLQGEAWIR QRLAP
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