| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1433 |
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| Symbol | |
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| ID | 5109722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1593032 |
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| End bp | 1595752 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502662 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001186930 |
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| Protein GI | 146306465 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.548118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCTACC TACTGTCCCT GATCGCCCTG GCTGCTGTCT CGGCGCCGGC GCTGACGCGC
CTGCTGGGCG CCCGCACCGG CTGGCTGCTG ATGCTGGCAC CACTGGTGGC GTTCATCTGG
TTCGTCCAGC AGATTCCGCT GGTGGCCGGT GGCGAGACCG TGCTGCAGAG CCTGAGCTGG
ATTCCGGCGC TGGGCATCAA CCTGAGCCTA CGCCTGGATG GGCTTTCCCT GTTGTTCGCC
CTGCTGATCA GCGGCATCGG CAGCCTGATC GTGCTGTATG CCGGCAGTTA CCTGTCCAGC
CATGTCCATC TCGGGCGCTT TCATGCCTAC CTGCTGGTGT TCATGCTGGC CATGCTCGGT
CTGGTGCTGG CCGACGATCT GGTGGCGATG TTCGTGTTCT GGGAGCTGAC CAGCATCGCC
TCGTTCCTGC TGATCAGCTT TCAGCACGAC AAAGCCGTAT CGCGCCGTGC TGCGCTACAG
GCCTTGCTGA TCACCGGCGG TGGCGGCCTG GCGCTGCTGG CCGGGCTGAT CCTGCTCGGC
GGCGCCACCG GCAACTGGCA GTTCTCCAGC CTCAGCGCCG AGCAGATCGA AGGCCACGCG
CTGCTGCCGG CCATCATGCT GCTGGTGCTG CTGGGCTGCT TCACCAAGTC GGCGCAGGTG
CCCTTCCACC TGTGGCTGCC CAATGCGATG AACGCACCGA CCCCGGTGTC GGCCTATCTG
CACTCGGCGA CCATGGTCAA GGCCGGCATC TACCTGCTCG CCCGACTTAA TCCGGTGCTC
GGCGGCTCCA TCGGCTGGGG CACCCTGCTG ATCACCTTCG GCGCGGCCAC CGCGGTACTG
GGTGCCTTCC TCGCCTTCCG CCAGACCGAC CTCAAGCGCC TGCTGGCCTA CACCACAGTG
ACCGTGCTGG GCCAGCTGAC CATGCTGATC GGCACCAACA CCAGCTATGG CCTGCAGGCC
TTCGTCCTCT ATCTGGTGGC GCACTCCCTT TATAAAGGTG CGCTGTTCAT GGCCGTCGGC
GCCATCGACC ACGCCACCGG CACCCGCGAG CTGGCGCGCC TGGGCGGTTT GATCCGTTTC
ATGCCGCTGA CCGGCGCCGC CGTGGCCCTG GCGGCGTTCT CCAACGCCGG CCTGCCGCCG
TTCTTCGGCT TCATCGCCAA GGAGTTCAAG TACAGCGGCC TGATCGAGAT GGGTCATATC
GGCTGGGCGG TGACCCTGGT GATGATCCTC ACCAATGCCC TGCTGTTCGC CGCCGCCGGC
CTGGTATTCC TGCAAACCTT CCTCGGCAGG CGTGGCGACT ACCCGCGCAC GCCGCACGAG
GTTGGCCTGC CGATGTGGCT GGGCCCCATG CTGCTGGCCA TCGGCGGCTT CTTCCTCGGC
GCCTGGAACG CCTGGCCGGA GACCTGGCTG GTCAATACGG CCGTGCAGGC GGTGGCGCGC
GGCCCGGTGG ACGTCAATCT GTACCTCTGG GGCGGCATTA CCCCGGCGCT GGTGGCAAGC
CTGGTGACGG TCTCGCTGGG GGTGTTTTTC TACCTGCTGC GCGATCGCGT CAGGCAGGTG
CTGGATCGCG CCAACGCCGC CTGGAACGTC AGTGGCGACC TGCTCTGGGA TCGCCTGCTC
AAGCGCGTGT TCTTTTTCGC CGGGCTGCTG GCGGCACGCT TTCAGCACGG TTCGCTGCGC
CAGCACCTGG TGCTGCTGGC CCTGGCGGTC GGCGGGCTGC TGGCCGTCGG CCTGCTGCCG
GCGCTGCCGC AACTGCTGCA GGGCAGCTAC AGCCCCATCT CCCTGCTGGG CGCGGCCGGT
TGCCTGGTGG CCCTGGCCGG CGGCGTGGCG GCGGCCTTCC TGCCCGGGCG CCTGACCCTG
CTGGCCGCGC TCGGCGCCTG CGGCCTGGGC CTGGCGATGA TCTTCGTCTC GGTCAACGCG
CCGGACGTGG CCATGACCCA GCTGATGGTG GAAACCCTCA GCCTGATCTT CCTCGCCCTG
GTGTTTCGCA AGATGCCCAC CGTGCCGCCG AGCGGCGCAC GCGCCCCCTG GAAGCGCCGC
CTGCATGCCG GCGTGGCCAT CCTCTTCGGC CTCAGCGTGA CCGGCGCCCT GCTGCTGGCG
GTCAGCCTGC CGCTGCCGGG CGAGGTCGCC CAGTGGTACC AGGCCAACAG CCTGCCGGGC
GGGCACGGGC ACAACGTGGT CAACGTGATT CTGGTGGACT TCCGCGCCTT CGACACCCTA
GGCGAGATCC TCGTGGTGGC CCTTTCCGCC CTGGCCGCCG CCAGTCTGCT CGGCAGTGGC
CAGCGCATCG GCAACGAGCA CGGCGGCGAA GACGCCTTCA CCTCGCCGCT GCTGCGCCAG
GGCCTGCGCC CGCTGGCCTG GCTGATGATG GCGGCCTCGC TGCTGCTGCT GTGGCGTGGC
CATAACCTGC CAGGCGGCGG CTTCATCGGC GGTCTGGTGG CGGCCTGCGG CCTGATCCTG
CTGGTGCTGA CCTACGGCCA CGGGCAGATT CGCCGGGTGC TGCCGCTGCC ACCGGCACAG
CTGATCGGCA TCGGTCTGGG CTGCGCGGCA GGTGCCGGCA TTCTCGGCCT GCTCGCCGGT
AGCGCCTTTC TCACCGGCCT TTGGATCTTC CCCGGCGGGC TGCCGCTGGG TACGCCGCTG
TTGTTCGATG TCGGCGTATT CCTCACCGTG TTCGGCTCCG CCCTGCACAT GATCGACAAG
CTGACGGGAG TACGCCACTG A
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| Protein sequence | MLYLLSLIAL AAVSAPALTR LLGARTGWLL MLAPLVAFIW FVQQIPLVAG GETVLQSLSW
IPALGINLSL RLDGLSLLFA LLISGIGSLI VLYAGSYLSS HVHLGRFHAY LLVFMLAMLG
LVLADDLVAM FVFWELTSIA SFLLISFQHD KAVSRRAALQ ALLITGGGGL ALLAGLILLG
GATGNWQFSS LSAEQIEGHA LLPAIMLLVL LGCFTKSAQV PFHLWLPNAM NAPTPVSAYL
HSATMVKAGI YLLARLNPVL GGSIGWGTLL ITFGAATAVL GAFLAFRQTD LKRLLAYTTV
TVLGQLTMLI GTNTSYGLQA FVLYLVAHSL YKGALFMAVG AIDHATGTRE LARLGGLIRF
MPLTGAAVAL AAFSNAGLPP FFGFIAKEFK YSGLIEMGHI GWAVTLVMIL TNALLFAAAG
LVFLQTFLGR RGDYPRTPHE VGLPMWLGPM LLAIGGFFLG AWNAWPETWL VNTAVQAVAR
GPVDVNLYLW GGITPALVAS LVTVSLGVFF YLLRDRVRQV LDRANAAWNV SGDLLWDRLL
KRVFFFAGLL AARFQHGSLR QHLVLLALAV GGLLAVGLLP ALPQLLQGSY SPISLLGAAG
CLVALAGGVA AAFLPGRLTL LAALGACGLG LAMIFVSVNA PDVAMTQLMV ETLSLIFLAL
VFRKMPTVPP SGARAPWKRR LHAGVAILFG LSVTGALLLA VSLPLPGEVA QWYQANSLPG
GHGHNVVNVI LVDFRAFDTL GEILVVALSA LAAASLLGSG QRIGNEHGGE DAFTSPLLRQ
GLRPLAWLMM AASLLLLWRG HNLPGGGFIG GLVAACGLIL LVLTYGHGQI RRVLPLPPAQ
LIGIGLGCAA GAGILGLLAG SAFLTGLWIF PGGLPLGTPL LFDVGVFLTV FGSALHMIDK
LTGVRH
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