Gene Pmen_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1430 
Symbol 
ID5109719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1590638 
End bp1591135 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content68% 
IMG OID640502659 
Productcation antiporter 
Protein accessionYP_001186927 
Protein GI146306462 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.741188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTC TCGTCCATCT GCTGGCCAGC GCGGGCCTGG CCTGGAGCCT CGGCAGTGCT 
CATCTGGGCG GCGGCCTGCT GGCCTTCGCG ACGCTCTATC TGCTCGCCCG CCTGCTGGGC
CTGGCCGTGG CACGTCTGCG CCGTTATGCG CAAAGCCTGG AACATGGCAT CAGCTTCTGT
TTGTGGTTCA TCGCCCAGGT GTTCCTCGCC ACCTACCACG TCGCCACCCT GGTGCTGGCA
CGGCGGGTGG AGGTGGAGCC GGCAGTGCTG GCCTACCCGG TCACCCGCCG CGAGGTGGAC
AAGGTCACCC TGCTCGGCAC CCTGCTGACC CTCACCCCCG GCACCCTGGC CCTGGAATAC
GACGAGGAGC GCGGCCTGCT CTACATCCAC GCCCTCGACG CCAGGCGCAG CGAGGACGTG
ACGCACATTC TGACCGAGCT GGAACGCCGC CTGCTGGCCT GGCTCGATGC CGGCAAACGC
GAAGGAGTAA GCCCATGA
 
Protein sequence
MPFLVHLLAS AGLAWSLGSA HLGGGLLAFA TLYLLARLLG LAVARLRRYA QSLEHGISFC 
LWFIAQVFLA TYHVATLVLA RRVEVEPAVL AYPVTRREVD KVTLLGTLLT LTPGTLALEY
DEERGLLYIH ALDARRSEDV THILTELERR LLAWLDAGKR EGVSP