Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1423 |
Symbol | |
ID | 5109712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1585276 |
End bp | 1586010 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502652 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001186920 |
Protein GI | 146306455 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0509995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCCC ACCTTTCGAG GGTTTTGCCT TTTCTCTTGG TCAGCAGTGT TCTCTCCGGT TGTGCCACGA CTTCCAGTAC GGGAGACGCG CCGCTCAACC AGGGGAACTG GCCCCTGTGC AGTGCGATCG GAGCCCTGGC CGGTGGCGGC CTGGGTGCCA TCGAGAGTTC CACCTGGGCA GCAGGCGGCG CTGTCGCCGG TGCGCTGCTC GGCACCATCA TCTGTTACGC GCAGGATGGC GACGAGGACG GTGACGGCGT GTTCGACCGC CGCGACCGCT GCCCCGGCAC ACCTGCCGGT ACCGCAGTGA GCCATAACGG CTGCCCGTTG CCGCAGTATC CCGCCAGCGC CCCTGTTGCG CCTGCCATGG AGCCGGTAGC GCAGGACGAA GTCATCGTCC TGAGCGACCT GGGCAACGTG CTGTTCGCCT TTGACTCCGC GGAACTGACC GCCGAGGCGC GACGCCTGCT CACCGATGTC AGCGCACGGT TGACCGGCGC CAGCCTGGTC TCGGTGAAGG TCGTCGGTCA TACCGACAGC GTCGGTTCGG ACGCCTACAA CCAGGGCCTG TCCGAGCGCC GTGCGCGTAG CGTGGCGGAT TTCCTCGTTG CCCAGGGCGT GCCGGCTGGC AAGCTCAGCA CCGAAGGACG CGGCGAGAGC CAGCCGGTGG CGGACAACGG CAGTGATGCC GGGCGTGCGC AGAACCGCAG GGTAGAGCTG TACGTTTCCC GTTGA
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Protein sequence | MRAHLSRVLP FLLVSSVLSG CATTSSTGDA PLNQGNWPLC SAIGALAGGG LGAIESSTWA AGGAVAGALL GTIICYAQDG DEDGDGVFDR RDRCPGTPAG TAVSHNGCPL PQYPASAPVA PAMEPVAQDE VIVLSDLGNV LFAFDSAELT AEARRLLTDV SARLTGASLV SVKVVGHTDS VGSDAYNQGL SERRARSVAD FLVAQGVPAG KLSTEGRGES QPVADNGSDA GRAQNRRVEL YVSR
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