Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1418 |
Symbol | |
ID | 5109707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1581513 |
End bp | 1582067 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640502647 |
Product | hypothetical protein |
Protein accession | YP_001186915 |
Protein GI | 146306450 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.119631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCGCT ATGAGATCGC CTTCTCCGGG CAACTGGTGC CTGGCGCCCA ACCGGAGCTG GTCAAGGCCA ACATGGCCAA GCTGTTCCAG GCTGACGCCC AGCGCATCGC TCAGCTGTTT TCCGGCCGTC GCATCGTGAT CAAGAACAAT CTTGATGCGG CCGGGGCGGA GAAGTACCGG GCGACGCTGG AGCGCGCCGG TGCGCGGGTG GAAGTGGTCG ACATGGACAT GCCGATTGAG GAGGTCGAGC TGGCGCCTCC GCCTCCGCTC GAAACGGCCG GCGCACCGGT GGTGCCGGCC GCAGCGCCCA GGCCGGGACG CCTGCAGGTG GCTCCGCGCG ACGAGTACAT GGCGGCATTC AGCGAAGTGG ATGCGCCCGA CTTCGGCATC GCCCCGGTAG GTGCCGATCT GCAGGACGCC AAGCCCGATG CCCAGGCGCC TCGCGTCGAC CTCTCGCAGT TCAGTCTGGC CCCGGTGGGC AGCGACATGG GCCAGGCCAA GGCCGAGGCC GCCGCGCCAC CGCCGGATAC CTCGCATCTG AAACTGCAGG AGTGA
|
Protein sequence | MSRYEIAFSG QLVPGAQPEL VKANMAKLFQ ADAQRIAQLF SGRRIVIKNN LDAAGAEKYR ATLERAGARV EVVDMDMPIE EVELAPPPPL ETAGAPVVPA AAPRPGRLQV APRDEYMAAF SEVDAPDFGI APVGADLQDA KPDAQAPRVD LSQFSLAPVG SDMGQAKAEA AAPPPDTSHL KLQE
|
| |