Gene Pmen_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1418 
Symbol 
ID5109707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1581513 
End bp1582067 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID640502647 
Producthypothetical protein 
Protein accessionYP_001186915 
Protein GI146306450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.119631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCT ATGAGATCGC CTTCTCCGGG CAACTGGTGC CTGGCGCCCA ACCGGAGCTG 
GTCAAGGCCA ACATGGCCAA GCTGTTCCAG GCTGACGCCC AGCGCATCGC TCAGCTGTTT
TCCGGCCGTC GCATCGTGAT CAAGAACAAT CTTGATGCGG CCGGGGCGGA GAAGTACCGG
GCGACGCTGG AGCGCGCCGG TGCGCGGGTG GAAGTGGTCG ACATGGACAT GCCGATTGAG
GAGGTCGAGC TGGCGCCTCC GCCTCCGCTC GAAACGGCCG GCGCACCGGT GGTGCCGGCC
GCAGCGCCCA GGCCGGGACG CCTGCAGGTG GCTCCGCGCG ACGAGTACAT GGCGGCATTC
AGCGAAGTGG ATGCGCCCGA CTTCGGCATC GCCCCGGTAG GTGCCGATCT GCAGGACGCC
AAGCCCGATG CCCAGGCGCC TCGCGTCGAC CTCTCGCAGT TCAGTCTGGC CCCGGTGGGC
AGCGACATGG GCCAGGCCAA GGCCGAGGCC GCCGCGCCAC CGCCGGATAC CTCGCATCTG
AAACTGCAGG AGTGA
 
Protein sequence
MSRYEIAFSG QLVPGAQPEL VKANMAKLFQ ADAQRIAQLF SGRRIVIKNN LDAAGAEKYR 
ATLERAGARV EVVDMDMPIE EVELAPPPPL ETAGAPVVPA AAPRPGRLQV APRDEYMAAF
SEVDAPDFGI APVGADLQDA KPDAQAPRVD LSQFSLAPVG SDMGQAKAEA AAPPPDTSHL
KLQE