Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1414 |
Symbol | |
ID | 5109703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1577468 |
End bp | 1579981 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640502643 |
Product | penicillin amidase |
Protein accession | YP_001186911 |
Protein GI | 146306446 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.290325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACGC TGGCCTACCT GACTCTTGCC GCCTCGCTGA CCGGCCTCGC CGGCTGCCAA TCCTTTCTCA ACAGCCGCTA TGCCGACAGC GTGCCGCCCA CCCGTGGCGT GGAGCGTGTG CAGGGCATTG CCGAAAGCGC ATCGGTACGG CGCAACGCCC TCGGCATGCC GCTGATCGAG TCGGGTACCT TCCACGACGC GCTGTTCACC CTGGGTTACG TGCACGCCGG CGACCGCCTC AGCCAGATGG TCGGCATGCG CCTGCTGGCC CAGGGCCGCC TGGCGGAAAT GGCCGGCCCC GGCGTGCTGG AGATGGACCG CTTCATGCGC GCGGTGAACC TGAAGAAAAG CGCGGAGTTC CTCTACGCCG ACGCCTCACC GCGCCTGAAA CGCTTCTTCG AGGTCTATGC GCGGGGCGTC AACGCCTACA TGTTCCGCTA CCGCGACCGC CTGCCGATGG ACCTGGCCGA AGCCGGCTAC CGTCCCGAGT ACTGGAAGCC CGAGGACTCG GTGCTGCTGT TCTGCCTGCT CAACTTCGGC CTGTCGGTGA ACCTGCAGGA AGAGGTCGCC GCGCTGACCC TGGCGCAGCG CGTGGGCGCC GACAAGCTGC CCTGGCTGCT GCCCATCTAC CCGGACGAGC CGCTGCCCTT CGCCGAAGCG GAAAAGCTCG CCGGCCTCGA CCTGAAAGGC CAGCTGCCGG GTCTGCAGGC GATTTCCCGC ACCGCCGCGC AGATCGCCGA ACAGCACATG CTCGGCGTCG CCGCCTCGAA CAACTGGGCC ATCGCGCCGC AGCGAACCCG TGGCGGCAAG AGCCTGCTGG CCAACGACAC GCACCTGCCG CTGGCGATGC CTTCGCTGTG GAATTTCGTG CAGATCCGCT CGCCCAAGTA CCAGGCCGCC GGCGTCTCGC TGGCCGGCGT GCCGGCGGTG GTCGCCGGCT ACAACGGCAA GCTGGCCTGG GGCATGACCA TGGTCATGGG CGACAATCAG GACATCTATC TCGAGCGCAT CCGCCGCGAA GGCAGCCGCC TGATGTACGA GGCCGACGGC AAATGGCTGC CGGTCACCGA GCGCCAGGAA ACCTTCTTCA TCAAGGGTCA GCGACCGATC CGCGAAACGC TCTTCGAAAC GCGCAACGGC CCGCTGCTCA ATTCGGTGCT GGGCGAACGC AAGCATCCGC TGCAGCCGCT ACCCGTGCAG AGCGGCTACG GCCTGGCGCT CAAGACCACG CAGTTCGAGC GCGACCAGAG CCTCGATGCG TTCTTCGACC TGTCCCGCGC GCAGTCGGTG GACGCGGCCT TCGAGGTCGC TCGCGAGATT CGCGCGATGC CGCTGAACAT CGTCTTCGCC GATGCCCAGC ACATCGGCTG GCAGGTCACC GGGCGCTACC CGAACCGCCG CGACGGCCGT GGCCTGCTGC CCTCCCCCGG CTGGGACGAG CGCTACGCCT GGGACGGCTT CGCCGACCCG ATGCTGCACC CTTACGATCA GGACCCACCG CAAGGCTGGC TGGGCACCGC CAACGAGCGC AGCGTACCGC CGGGCTACGG CATGCAGCTG TCCAGCTCCT GGTACTACCC GGAGCGCGCC GAGCGCATCG CCGAACTGGC CGGCCGCGGC AGCCACGACG GTCGCAGCAT GATCGCCATG CAGTACGACC AGACCTCGCC CTTCGTCGCC AAGCTGCAGG CCATGTTCAA CGACCCGGCC ATGCACGACC CGCTGCGCCA GGCCATCGCG GCGCTGCCGG CCGGCCAGCG CGAACGTGCC GACGAAGCCC TGAAACGCCT TCTGGCGTTC GACGGCAAAC TGGCGGCCAG CTCGGCCGAT GCCGCCATCT ACGGCGCCTT CCTCCACGAA AGCGCGCGGC AGATCTTCCT CGACGAGCTC GGCCCGGAAG ACAGCCCGGC CTGGAACGCA CTGGTGCAAA CCGCCAACGC CTCCTACTCG GCACAAGCCG ACCACCTGCT CGGCCGCGCC GACAGCCCGT TCTGGAACGA CGTCCGCACG CCCGAGCAGG AAGACAAGCC GACCATCCTG GCGCGCAGCC TGGCGGCCAG CATCACCCTG CTCGAGAGCC GCCTGGGCGC TGAGCGGCGC AACTGGCAAT GGGGCAAGCT GCACACCTAC GAATGGGTGA CCGACACCAC CCGCCTGGCG CCCTACATGA GCGCCGGCCA GCGCAGCAGC ATCAATGCCC TGAAAGGTTA TCTGGACCGC GGCCCCTACC CGGCCGGCGG CGACCACAGC ACCCTCAACG TCGCCGCCTA TGCCTGGGGC CAAAACTTCG ATACCTGGCT GGTTCCGGCC ATGCGCATCG TGGTGGACTT CGCCGCCGAC GAGCCGCTGA TCGGCGTCAA CAGCTCCGGC CAGTCGGGCA ACCCGGCCAG CCCGCACTAC GCCGACGGCA TAGACGCCTG GCTCAAGGCC GGTTACATGA GCTTCCCGTT CAAATCGGAG AATCTGGATA AGGTCTACGG CAACCAGCGT CTGCTGCTGA TGCCGGGCAA ATGA
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Protein sequence | MRTLAYLTLA ASLTGLAGCQ SFLNSRYADS VPPTRGVERV QGIAESASVR RNALGMPLIE SGTFHDALFT LGYVHAGDRL SQMVGMRLLA QGRLAEMAGP GVLEMDRFMR AVNLKKSAEF LYADASPRLK RFFEVYARGV NAYMFRYRDR LPMDLAEAGY RPEYWKPEDS VLLFCLLNFG LSVNLQEEVA ALTLAQRVGA DKLPWLLPIY PDEPLPFAEA EKLAGLDLKG QLPGLQAISR TAAQIAEQHM LGVAASNNWA IAPQRTRGGK SLLANDTHLP LAMPSLWNFV QIRSPKYQAA GVSLAGVPAV VAGYNGKLAW GMTMVMGDNQ DIYLERIRRE GSRLMYEADG KWLPVTERQE TFFIKGQRPI RETLFETRNG PLLNSVLGER KHPLQPLPVQ SGYGLALKTT QFERDQSLDA FFDLSRAQSV DAAFEVAREI RAMPLNIVFA DAQHIGWQVT GRYPNRRDGR GLLPSPGWDE RYAWDGFADP MLHPYDQDPP QGWLGTANER SVPPGYGMQL SSSWYYPERA ERIAELAGRG SHDGRSMIAM QYDQTSPFVA KLQAMFNDPA MHDPLRQAIA ALPAGQRERA DEALKRLLAF DGKLAASSAD AAIYGAFLHE SARQIFLDEL GPEDSPAWNA LVQTANASYS AQADHLLGRA DSPFWNDVRT PEQEDKPTIL ARSLAASITL LESRLGAERR NWQWGKLHTY EWVTDTTRLA PYMSAGQRSS INALKGYLDR GPYPAGGDHS TLNVAAYAWG QNFDTWLVPA MRIVVDFAAD EPLIGVNSSG QSGNPASPHY ADGIDAWLKA GYMSFPFKSE NLDKVYGNQR LLLMPGK
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