Gene Pmen_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1414 
Symbol 
ID5109703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1577468 
End bp1579981 
Gene Length2514 bp 
Protein Length837 aa 
Translation table11 
GC content68% 
IMG OID640502643 
Productpenicillin amidase 
Protein accessionYP_001186911 
Protein GI146306446 
COG category[R] General function prediction only 
COG ID[COG2366] Protein related to penicillin acylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.290325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACGC TGGCCTACCT GACTCTTGCC GCCTCGCTGA CCGGCCTCGC CGGCTGCCAA 
TCCTTTCTCA ACAGCCGCTA TGCCGACAGC GTGCCGCCCA CCCGTGGCGT GGAGCGTGTG
CAGGGCATTG CCGAAAGCGC ATCGGTACGG CGCAACGCCC TCGGCATGCC GCTGATCGAG
TCGGGTACCT TCCACGACGC GCTGTTCACC CTGGGTTACG TGCACGCCGG CGACCGCCTC
AGCCAGATGG TCGGCATGCG CCTGCTGGCC CAGGGCCGCC TGGCGGAAAT GGCCGGCCCC
GGCGTGCTGG AGATGGACCG CTTCATGCGC GCGGTGAACC TGAAGAAAAG CGCGGAGTTC
CTCTACGCCG ACGCCTCACC GCGCCTGAAA CGCTTCTTCG AGGTCTATGC GCGGGGCGTC
AACGCCTACA TGTTCCGCTA CCGCGACCGC CTGCCGATGG ACCTGGCCGA AGCCGGCTAC
CGTCCCGAGT ACTGGAAGCC CGAGGACTCG GTGCTGCTGT TCTGCCTGCT CAACTTCGGC
CTGTCGGTGA ACCTGCAGGA AGAGGTCGCC GCGCTGACCC TGGCGCAGCG CGTGGGCGCC
GACAAGCTGC CCTGGCTGCT GCCCATCTAC CCGGACGAGC CGCTGCCCTT CGCCGAAGCG
GAAAAGCTCG CCGGCCTCGA CCTGAAAGGC CAGCTGCCGG GTCTGCAGGC GATTTCCCGC
ACCGCCGCGC AGATCGCCGA ACAGCACATG CTCGGCGTCG CCGCCTCGAA CAACTGGGCC
ATCGCGCCGC AGCGAACCCG TGGCGGCAAG AGCCTGCTGG CCAACGACAC GCACCTGCCG
CTGGCGATGC CTTCGCTGTG GAATTTCGTG CAGATCCGCT CGCCCAAGTA CCAGGCCGCC
GGCGTCTCGC TGGCCGGCGT GCCGGCGGTG GTCGCCGGCT ACAACGGCAA GCTGGCCTGG
GGCATGACCA TGGTCATGGG CGACAATCAG GACATCTATC TCGAGCGCAT CCGCCGCGAA
GGCAGCCGCC TGATGTACGA GGCCGACGGC AAATGGCTGC CGGTCACCGA GCGCCAGGAA
ACCTTCTTCA TCAAGGGTCA GCGACCGATC CGCGAAACGC TCTTCGAAAC GCGCAACGGC
CCGCTGCTCA ATTCGGTGCT GGGCGAACGC AAGCATCCGC TGCAGCCGCT ACCCGTGCAG
AGCGGCTACG GCCTGGCGCT CAAGACCACG CAGTTCGAGC GCGACCAGAG CCTCGATGCG
TTCTTCGACC TGTCCCGCGC GCAGTCGGTG GACGCGGCCT TCGAGGTCGC TCGCGAGATT
CGCGCGATGC CGCTGAACAT CGTCTTCGCC GATGCCCAGC ACATCGGCTG GCAGGTCACC
GGGCGCTACC CGAACCGCCG CGACGGCCGT GGCCTGCTGC CCTCCCCCGG CTGGGACGAG
CGCTACGCCT GGGACGGCTT CGCCGACCCG ATGCTGCACC CTTACGATCA GGACCCACCG
CAAGGCTGGC TGGGCACCGC CAACGAGCGC AGCGTACCGC CGGGCTACGG CATGCAGCTG
TCCAGCTCCT GGTACTACCC GGAGCGCGCC GAGCGCATCG CCGAACTGGC CGGCCGCGGC
AGCCACGACG GTCGCAGCAT GATCGCCATG CAGTACGACC AGACCTCGCC CTTCGTCGCC
AAGCTGCAGG CCATGTTCAA CGACCCGGCC ATGCACGACC CGCTGCGCCA GGCCATCGCG
GCGCTGCCGG CCGGCCAGCG CGAACGTGCC GACGAAGCCC TGAAACGCCT TCTGGCGTTC
GACGGCAAAC TGGCGGCCAG CTCGGCCGAT GCCGCCATCT ACGGCGCCTT CCTCCACGAA
AGCGCGCGGC AGATCTTCCT CGACGAGCTC GGCCCGGAAG ACAGCCCGGC CTGGAACGCA
CTGGTGCAAA CCGCCAACGC CTCCTACTCG GCACAAGCCG ACCACCTGCT CGGCCGCGCC
GACAGCCCGT TCTGGAACGA CGTCCGCACG CCCGAGCAGG AAGACAAGCC GACCATCCTG
GCGCGCAGCC TGGCGGCCAG CATCACCCTG CTCGAGAGCC GCCTGGGCGC TGAGCGGCGC
AACTGGCAAT GGGGCAAGCT GCACACCTAC GAATGGGTGA CCGACACCAC CCGCCTGGCG
CCCTACATGA GCGCCGGCCA GCGCAGCAGC ATCAATGCCC TGAAAGGTTA TCTGGACCGC
GGCCCCTACC CGGCCGGCGG CGACCACAGC ACCCTCAACG TCGCCGCCTA TGCCTGGGGC
CAAAACTTCG ATACCTGGCT GGTTCCGGCC ATGCGCATCG TGGTGGACTT CGCCGCCGAC
GAGCCGCTGA TCGGCGTCAA CAGCTCCGGC CAGTCGGGCA ACCCGGCCAG CCCGCACTAC
GCCGACGGCA TAGACGCCTG GCTCAAGGCC GGTTACATGA GCTTCCCGTT CAAATCGGAG
AATCTGGATA AGGTCTACGG CAACCAGCGT CTGCTGCTGA TGCCGGGCAA ATGA
 
Protein sequence
MRTLAYLTLA ASLTGLAGCQ SFLNSRYADS VPPTRGVERV QGIAESASVR RNALGMPLIE 
SGTFHDALFT LGYVHAGDRL SQMVGMRLLA QGRLAEMAGP GVLEMDRFMR AVNLKKSAEF
LYADASPRLK RFFEVYARGV NAYMFRYRDR LPMDLAEAGY RPEYWKPEDS VLLFCLLNFG
LSVNLQEEVA ALTLAQRVGA DKLPWLLPIY PDEPLPFAEA EKLAGLDLKG QLPGLQAISR
TAAQIAEQHM LGVAASNNWA IAPQRTRGGK SLLANDTHLP LAMPSLWNFV QIRSPKYQAA
GVSLAGVPAV VAGYNGKLAW GMTMVMGDNQ DIYLERIRRE GSRLMYEADG KWLPVTERQE
TFFIKGQRPI RETLFETRNG PLLNSVLGER KHPLQPLPVQ SGYGLALKTT QFERDQSLDA
FFDLSRAQSV DAAFEVAREI RAMPLNIVFA DAQHIGWQVT GRYPNRRDGR GLLPSPGWDE
RYAWDGFADP MLHPYDQDPP QGWLGTANER SVPPGYGMQL SSSWYYPERA ERIAELAGRG
SHDGRSMIAM QYDQTSPFVA KLQAMFNDPA MHDPLRQAIA ALPAGQRERA DEALKRLLAF
DGKLAASSAD AAIYGAFLHE SARQIFLDEL GPEDSPAWNA LVQTANASYS AQADHLLGRA
DSPFWNDVRT PEQEDKPTIL ARSLAASITL LESRLGAERR NWQWGKLHTY EWVTDTTRLA
PYMSAGQRSS INALKGYLDR GPYPAGGDHS TLNVAAYAWG QNFDTWLVPA MRIVVDFAAD
EPLIGVNSSG QSGNPASPHY ADGIDAWLKA GYMSFPFKSE NLDKVYGNQR LLLMPGK