Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1407 |
Symbol | |
ID | 5109696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1572179 |
End bp | 1572388 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640502636 |
Product | cold-shock DNA-binding protein family protein |
Protein accession | YP_001186904 |
Protein GI | 146306439 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0231172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.970454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATC GTCAGACTGG CACCGTCAAG TGGTTCAACG ATGAGAAAGG CTACGGCTTC ATCACCCCGC AATCCGGTGA CGACCTCTTC GTACACTTCA AAGCCATCCA GAGCGACGGT TTCAAATCCC TGAAGGAAGG CCAGCAGGTT TCCTTCGTGG CTACCCGTGG CCAGAAAGGC ATGCAGGCTG AGGAAGTTCA GGTTATCTAA
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Protein sequence | MSNRQTGTVK WFNDEKGYGF ITPQSGDDLF VHFKAIQSDG FKSLKEGQQV SFVATRGQKG MQAEEVQVI
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