Gene Pmen_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1406 
Symbol 
ID5109695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1570568 
End bp1571656 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content65% 
IMG OID640502635 
Producthypothetical protein 
Protein accessionYP_001186903 
Protein GI146306438 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.295791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.937662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG TCACCCGCGA AGCGGTCGAA GCCTGTCTGC GTCAGTTCAC CGACCCCCAT 
CTCGATCAGG ACCCGGTCAG TGCCGGTTGC CTGCGCGAGG TCGACATCCA GGGTGCGCGC
GTCGCCGTGC GTCTGGAGCT GGGCTATGCC GCCGGCCTGT TCAAGAACGG TTGGGCGCAG
ATGCTGCAGA TGGCGCTGGA GAACCTCGAT GGCGTCGACA GCGCTCAGGT GCAGGTCGAT
TGCGTGATCG ACTCGCATCA GGGCCAGGCC CAGGTGCCGG CACTGGCCGG GGTGAAGAAC
GTTATCGCCG TGGCTTCGGG CAAGGGCGGC GTGGGCAAAT CCACCACGGC GGCCAACCTG
GCGCTGGCGC TGGCCCGCGA GGGCGCGCGG GTGGGCATCC TCGACGCCGA TATCTACGGG
CCCAGCCAGG GCATCATGTT TGGCATCGCC GAGGGTACGC GGCCTGAAGT CCGCGAACAG
AAGTGGTTCG TGCCGCTCGA AGCCCATGGC GTGCAGGTGA TGTCCATGGC CTTTCTCACC
GACGACAACA CGCCGATGGT GTGGCGTGGG CCGATGGTCA GCGGCGCGTT GCTGCAGCTG
ATCACCCAGA CCGCCTGGAA CGATCTCGAT TACCTGGTGG TGGACATGCC GCCGGGCACC
GGCGACATCC AGCTGACCCT GGCGCAGAAG GTGCCGGTGG CCGGCAGCGT GATCGTCACC
ACGCCGCAGG ACCTGGCCCT GCTCGATGCC AAGAAAGGCG TGGAGATGTT CCGCAAGGTA
CATATTCCGG TGCTGGGCGT GGTGGAGAAC ATGGCGGTGC ACATCTGTTC CAATTGCGGC
CATGCCGAGC ACCTGTTCGG CGAGGGCGGC GGTGAGAAGC TGGCTGCGCA ATACGGCGTC
GAGCTGCTGG CCTCGTTGCC GCTGTCGATG GCCATCCGCA TGCAGGCCGA TGACGGCAAG
CCGACCACCA TTGCTGATCC GGAAAGCCAG ATCGCCATGA TCTATCAGGA CCTGGCGCGC
AAGGTCGGCG CGCGTATTGC CCTGGCTGGC AAGCCGGCGA TGCCCAGCAT CGAGATCAGT
GAGGATTAA
 
Protein sequence
MSAVTREAVE ACLRQFTDPH LDQDPVSAGC LREVDIQGAR VAVRLELGYA AGLFKNGWAQ 
MLQMALENLD GVDSAQVQVD CVIDSHQGQA QVPALAGVKN VIAVASGKGG VGKSTTAANL
ALALAREGAR VGILDADIYG PSQGIMFGIA EGTRPEVREQ KWFVPLEAHG VQVMSMAFLT
DDNTPMVWRG PMVSGALLQL ITQTAWNDLD YLVVDMPPGT GDIQLTLAQK VPVAGSVIVT
TPQDLALLDA KKGVEMFRKV HIPVLGVVEN MAVHICSNCG HAEHLFGEGG GEKLAAQYGV
ELLASLPLSM AIRMQADDGK PTTIADPESQ IAMIYQDLAR KVGARIALAG KPAMPSIEIS
ED