| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1392 |
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| Symbol | |
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| ID | 5109445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1555632 |
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| End bp | 1556678 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502621 |
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| Product | dihydroorotase |
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| Protein accession | YP_001186889 |
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| Protein GI | 146306424 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0418] Dihydroorotase |
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| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.452196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC GCCTGACTCT CCTGCGTCCC GATGACTGGC ACATTCACCT GCGCGATGGT
GCGGTGCTGC CACACACCGT CGGCGATGCC GCGCGCACTT TCGGCCGCGC CATCATCATG
CCCAACCTGG TTCCGCCGGT ACGCAATGCC GCCGAGGCCG ACGCCTATCG CCAGCGCATT
CTCGCTGCGC GCCCGGCCGG CAGCCGCTTC GAGCCGCTGA TGGTGCTCTA CCTCACCGAC
AACACCAGCC CCGAGGACGT CCGCGCGGCC AAGGCCAGCG GCTTCGTGCA TGCGGCCAAG
CTCTATCCGG CCGGTGCCAC CACCAACTCC GACTCGGGCG TCACCAGCAT CGACAAGATC
TTCCCGGCGC TGGAAGCCAT GGCCGAAGTC GGCATGCTGC TGCTGGTGCA TGGCGAGGTG
ACCCGCGCCG AGATCGACGT GTTCGACCGC GAAAAGGCCT TCATCGACGA GCACCTGACC
CGCGTGGTCG AGCGCTTCCC CACGCTGAAA GTGGTGTTCG AGCACATCAC CACCCGTGAC
GCGGTGCAGT TCGTCGAGGC GGCCTCGGCC AACGTCGGCG CCACCATCAC CGCGCACCAC
CTGCTGTACA ACCGCAACCA CATGCTGGTT GGCGGTATTC GCCCGCACTT CTACTGCCTG
CCGATCCTCA AGCGCAACGT GCACCAGGAA GCCCTGCTCG ACGCGGCCAC CAGCGGCAAC
GTCAAGTTCT TCCTCGGCAC CGACTCGGCG CCGCACGCCA AGCACGCCAA GGAAGCCGCC
TGCGGCTGTG CCGGCTGCTA CACCGCCTTC GCCGCCATCG AGCTGTACGC CGAGGCGTTC
GAACAGCGCA ACGCGCTGGA CAAGCTGGAA GCCTTTGCCA GCTTCCACGG CCCGGACTTC
TACGGCCTGC CGCGCAACAC CGATAGCATT ACCCTGGTCC GTGAAGAGTG GACCGTACCG
GCCAGCCTGC CGCTGGGCGA AAACAGCGTA GTACCGCTGC GTGCCGGCGA AACCCTGCGC
TGGAAGCTGC TGGAGGGCCA GGCGTGA
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| Protein sequence | MSDRLTLLRP DDWHIHLRDG AVLPHTVGDA ARTFGRAIIM PNLVPPVRNA AEADAYRQRI
LAARPAGSRF EPLMVLYLTD NTSPEDVRAA KASGFVHAAK LYPAGATTNS DSGVTSIDKI
FPALEAMAEV GMLLLVHGEV TRAEIDVFDR EKAFIDEHLT RVVERFPTLK VVFEHITTRD
AVQFVEAASA NVGATITAHH LLYNRNHMLV GGIRPHFYCL PILKRNVHQE ALLDAATSGN
VKFFLGTDSA PHAKHAKEAA CGCAGCYTAF AAIELYAEAF EQRNALDKLE AFASFHGPDF
YGLPRNTDSI TLVREEWTVP ASLPLGENSV VPLRAGETLR WKLLEGQA
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