| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1391 |
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| Symbol | |
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| ID | 5109444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1554961 |
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| End bp | 1555635 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502620 |
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| Product | ribonuclease T |
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| Protein accession | YP_001186888 |
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| Protein GI | 146306423 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.396287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAG ACAATTACGA AGACGAACTC GAACCCAGCC TGCCCTCCGG CCCGCGCACA
CCGATGGCGG CGCGCTTTCG CGGCTACCTG CCGGTGGTGG TGGATGTCGA GACTGGCGGC
TTCAACAGTG CTACCGACGC CCTGCTGGAA ATCGCCGCGA CCACCATCGC CATGGACGAG
AGCGGCTTTC TTTATCCGGA TCACACCCAC TTCTTCCGCA TCGAGCCCTT CGAAGGCGCC
AATATCGAAG CGGCGGCGCT GGAGTTCACC GGTATCAAGC TCGACCACCC GCTGCGCATG
GCGGTGAGCG AAGAGCACGC CCTCGGCGAG ATATTCAAGG GTTTGCGCAA GTCGATCAAA
TCGGCCGGCT GCAAGCGCGC GATCCTGGTC GGCCACAACA GCAGCTTCGA CCTGGGCTTT
CTGAATGCCG CGGTGGCGCG CTGCGGCATC AAGCGCAACC CCTTCCACCC CTTCTCCAGC
TTCGATACCG CCACCCTGGC CGGCCTCGCC TACGGCCAGA CCGTGCTGGC CAAGGCCTGC
CAGGCCGCCG GCATCGAGTT CGATGGCAAG GAGGCGCACT CGGCGCGCTA CGACACCGAG
AAGACGGCCG AGCTGTTCTG CGGCATCGTC AACCGCTGGA AGGAAATGGG CGGCTGGGAC
GAGTTCGATC AGTAG
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| Protein sequence | MSEDNYEDEL EPSLPSGPRT PMAARFRGYL PVVVDVETGG FNSATDALLE IAATTIAMDE
SGFLYPDHTH FFRIEPFEGA NIEAAALEFT GIKLDHPLRM AVSEEHALGE IFKGLRKSIK
SAGCKRAILV GHNSSFDLGF LNAAVARCGI KRNPFHPFSS FDTATLAGLA YGQTVLAKAC
QAAGIEFDGK EAHSARYDTE KTAELFCGIV NRWKEMGGWD EFDQ
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