Gene Pmen_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1390 
Symbol 
ID5109443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1554572 
End bp1554790 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content65% 
IMG OID640502619 
ProductBFD/(2Fe-2S)-binding domain-containing protein 
Protein accessionYP_001186887 
Protein GI146306422 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2906] Bacterioferritin-associated ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.347567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTCT GCCTCTGTGA AGGTGTCACC GATACGCAAA TCCGCGACGC GGTCTATGAA 
GGCTGCTGCA GCTACCGTGA AGTCCGCGGC ACCCTGGGCA TCGCCAGCCA GTGCGGCAAG
TGCGCCTGCC TGGCCAAGCA GGTGGTACGC GAGACCATCG CCGAAGTGCA GAGCAGCCAG
GCCAGCCTAG CCTACCCCGC CGGTTTCGCG GCTGCCTGA
 
Protein sequence
MYVCLCEGVT DTQIRDAVYE GCCSYREVRG TLGIASQCGK CACLAKQVVR ETIAEVQSSQ 
ASLAYPAGFA AA