Gene Pmen_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1388 
Symbol 
ID5109441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1553721 
End bp1554038 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content66% 
IMG OID640502617 
Producthypothetical protein 
Protein accessionYP_001186885 
Protein GI146306420 
COG category[S] Function unknown 
COG ID[COG5626] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.283816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC AATCTAGCAC CCTCTATGCC AAGCTGCTTG GCGAAACCGC GCCGATTCGC 
TGGCAGGAAT TGCAGCCTTT CTTCGCCCGT GGCGCGTTGC TCTGGGTCGA GGGCAATCAG
GATCTGGTCG CGGTCGCGCA GGCCGTGGCC GAGAACGATC AGGCACGTGT CGCGCAGTGG
ATGAGCGAGG GGCTGGTGGG CCGCCTCGAG GATGCGCGTG CCGAAGATCT GCTGACGCGC
GATCCGCAGC TCTGGGCCGT GGTGGTGGCG CCCTGGGTGC TGGTGCAGGA AAGGGCAGGG
GACGGGACGC TGCACTGA
 
Protein sequence
MTDQSSTLYA KLLGETAPIR WQELQPFFAR GALLWVEGNQ DLVAVAQAVA ENDQARVAQW 
MSEGLVGRLE DARAEDLLTR DPQLWAVVVA PWVLVQERAG DGTLH