Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1388 |
Symbol | |
ID | 5109441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1553721 |
End bp | 1554038 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640502617 |
Product | hypothetical protein |
Protein accession | YP_001186885 |
Protein GI | 146306420 |
COG category | [S] Function unknown |
COG ID | [COG5626] Uncharacterized conserved small protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.283816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATC AATCTAGCAC CCTCTATGCC AAGCTGCTTG GCGAAACCGC GCCGATTCGC TGGCAGGAAT TGCAGCCTTT CTTCGCCCGT GGCGCGTTGC TCTGGGTCGA GGGCAATCAG GATCTGGTCG CGGTCGCGCA GGCCGTGGCC GAGAACGATC AGGCACGTGT CGCGCAGTGG ATGAGCGAGG GGCTGGTGGG CCGCCTCGAG GATGCGCGTG CCGAAGATCT GCTGACGCGC GATCCGCAGC TCTGGGCCGT GGTGGTGGCG CCCTGGGTGC TGGTGCAGGA AAGGGCAGGG GACGGGACGC TGCACTGA
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Protein sequence | MTDQSSTLYA KLLGETAPIR WQELQPFFAR GALLWVEGNQ DLVAVAQAVA ENDQARVAQW MSEGLVGRLE DARAEDLLTR DPQLWAVVVA PWVLVQERAG DGTLH
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